RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PNOCQ13519 176 aa10.31□□□□□ -0.76
THBS3-201ENST00000368378 GRAMD1CQ8IYS0 662 aa10.31□□□□□ -0.76
THBS3-201ENST00000368378 STAMQ92783 540 aa10.31□□□□□ -0.76
THBS3-201ENST00000368378 BTG4Q9NY30 223 aa10.31□□□□□ -0.76
THBS3-201ENST00000368378 KDM6AO15550 1401 aaPredicted RBP10.31□□□□□ -0.76
THBS3-201ENST00000368378 URI1O94763 535 aaPredicted RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 FGAP02671 866 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 FAM193AP78312 1265 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 ELP1O95163 1332 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 NBPF26B4DH59 902 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 KIF28PB7ZC32 967 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 FOXN1O15353 648 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 METTL24Q5JXM2 366 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 NBPF14Q5TI25 921 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 NBPF10Q6P3W6 841 aaKnown RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 NBPF15Q8N660 670 aa10.3□□□□□ -0.76
THBS3-201ENST00000368378 MRPS27Q92552 414 aaKnown RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 BAZ2BQ9UIF8 2168 aaKnown RBP10.3□□□□□ -0.76
THBS3-201ENST00000368378 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 UTP14AQ9BVJ6 771 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 PES1O00541 588 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
THBS3-201ENST00000368378 CASP1P29466 404 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 FAM160A1Q05DH4 1040 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 SNW1Q13573 536 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 IQCB1Q15051 598 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 CCDC158Q5M9N0 1113 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 SLC9C2Q5TAH2 1124 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 DHX40Q8IX18 779 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 HAUS7Q99871 368 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 CWC25Q9NXE8 425 aaPredicted RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 KCNJ14Q9UNX9 436 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 ZNF213O14771 459 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 SPTLC2O15270 562 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 STX17P56962 302 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 TRDNQ13061 729 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 IMMTQ16891 758 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 MIGA1Q8NAN2 632 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 TDRD7Q8NHU6 1098 aaKnown RBP10.29□□□□□ -0.76
THBS3-201ENST00000368378 EEF2KMTQ96G04 330 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 XAGE2Q96GT9 111 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 JAG2Q9Y219 1238 aa10.29□□□□□ -0.76
THBS3-201ENST00000368378 ZNF202O95125 648 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 CTDSPL2Q05D32 466 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 USPL1Q5W0Q7 1092 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 LDHAL6AQ6ZMR3 332 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 DPF2Q92785 391 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 DESI2Q9BSY9 194 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
THBS3-201ENST00000368378 TBC1D2BQ9UPU7 963 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 XIRP1Q702N8 1843 aaKnown RBP10.28□□□□□ -0.76
THBS3-201ENST00000368378 MEGF6O75095 1541 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 UTRNP46939 3433 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 C5P01031 1676 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 SMTNL1A8MU46 457 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 TMEM232C9JQI7 657 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 KARSQ15046 597 aaKnown RBP10.28□□□□□ -0.76
THBS3-201ENST00000368378 FBXO38Q6PIJ6 1188 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 CCDC34Q96HJ3 373 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 SLC26A6Q9BXS9 759 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 CARMIL3Q8ND23 1372 aa10.28□□□□□ -0.76
THBS3-201ENST00000368378 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.76
THBS3-201ENST00000368378 PFKFB2O60825 505 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 TPM3P06753 285 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 KMT5BQ4FZB7 885 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 KIF18AQ8NI77 898 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 DCAF5Q96JK2 942 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 HINFPQ9BQA5 517 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 ALG1Q9BT22 464 aa10.27□□□□□ -0.76
THBS3-201ENST00000368378 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 SMIM22K7EJ46 135 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 GPAA1O43292 621 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 SEC31AO94979 1220 aaKnown RBP10.27□□□□□ -0.77
THBS3-201ENST00000368378 ADKP55263 362 aaKnown RBP10.27□□□□□ -0.77
THBS3-201ENST00000368378 ATG9AQ7Z3C6 839 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 DCCP43146 1447 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 PFKFB1P16118 471 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 LRP10Q7Z4F1 713 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
THBS3-201ENST00000368378 NAT10Q9H0A0 1025 aaKnown RBP10.27□□□□□ -0.77
THBS3-201ENST00000368378 AFDNP55196 1824 aaKnown RBP10.26□□□□□ -0.77
THBS3-201ENST00000368378 MINDY4BA8MYZ0 360 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
THBS3-201ENST00000368378 SYKP43405 635 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 AFMP43652 599 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 GYS2P54840 703 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 UBASH3AP57075 661 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 RABL6Q3YEC7 729 aaPredicted RBP10.26□□□□□ -0.77
THBS3-201ENST00000368378 LONRF3Q496Y0 759 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 ABCF2Q9UG63 623 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 ROBO1Q9Y6N7 1651 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 EYA2O00167 538 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms