RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 NEK11Q8NG66 645 aa12.72□□□□□ -0.37
NECTIN4-201ENST00000368012 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 SNAP23O00161 211 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 EVCP57679 992 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 DDX41Q9UJV9 622 aaKnown RBP12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 LONRF3Q496Y0 759 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 TMEM67Q5HYA8 995 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 DPF2Q92785 391 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
NECTIN4-201ENST00000368012 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 TERF2Q15554 542 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 ADALQ6DHV7 355 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 JMYQ8N9B5 988 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 KCNB2Q92953 911 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 ABCF2Q9UG63 623 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
NECTIN4-201ENST00000368012 CCZ1BP86790 482 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 CCZ1P86791 482 aaPredicted RBP12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 IFIT5Q13325 482 aaKnown RBP12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 CCDC102BQ68D86 513 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 ZNF609O15014 1411 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 TDO2P48775 406 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 ARMCX5Q6P1M9 558 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 CCDC150Q8NCX0 1101 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 PUS7LQ9H0K6 701 aaKnown RBP12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 XRN1Q8IZH2 1706 aaKnown RBP12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 RGPD1P0DJD0 1748 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 FOXN1O15353 648 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 GPAA1O43292 621 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 AGLP35573 1532 aa12.7□□□□□ -0.38
NECTIN4-201ENST00000368012 EYA2O00167 538 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 ATF3P18847 181 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 IL15P40933 162 aaPredicted RBP12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 LMAN1P49257 510 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 FAM193AP78312 1265 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 E4F1Q66K89 784 aaPredicted RBP12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 TIGD1Q96MW7 591 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 CTDSPL2Q05D32 466 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 KRT40Q6A162 431 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 PPFIBP1Q86W92 1011 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 LLPHQ9BRT6 129 aaKnown RBP12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 SLC12A7Q9Y666 1083 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 COL15A1P39059 1388 aa12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
NECTIN4-201ENST00000368012 ERICH2A1L162 156 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 CLCN6P51797 869 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 HSPA2P54652 639 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 SCARF1Q14162 830 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 PDIA6Q15084 440 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 FBXO18Q8NFZ0 1043 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 NAPBQ9H115 298 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 ZBTB43O43298 467 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 CBFA2T2O43439 604 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 RHOXF2BP0C7M4 288 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 CASP1P29466 404 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 DHX58Q96C10 678 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 PCMTD1Q96MG8 357 aaPredicted RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 RHOXF2Q9BQY4 288 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 NLRP12P59046 1061 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 MYL5Q02045 173 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 PCDHA5Q9Y5H7 936 aa12.68□□□□□ -0.38
NECTIN4-201ENST00000368012 HELLSQ9NRZ9 838 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 NFE2L3Q9Y4A8 694 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 MED23Q9ULK4 1368 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 BTBD18B2RXH4 712 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 ETF1P62495 437 aaKnown RBP12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 BAG1Q99933 345 aaPredicted RBP12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
NECTIN4-201ENST00000368012 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms