RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZNF76P36508 570 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 VAV2P52735 878 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 KCNH3Q9ULD8 1083 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 STK11IPQ8N1F8 1099 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 NEFHP12036 1026 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 EVCP57679 992 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 MKRN1Q9UHC7 482 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZC3H13Q5T200 1668 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 NLRP12P59046 1061 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC51Q96ER9 411 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZNF202O95125 648 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 TFCP2Q12800 502 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ADGRB3O60242 1522 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC42Q96M95 316 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 TSPOAP1O95153 1857 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 RASAL2Q9UJF2 1139 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 TSPY2A6NKD2 308 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZNF274Q96GC6 653 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 NSRP1Q9H0G5 558 aaKnown RBP13.37□□□□□ -0.27
CDC42BPA-202ENST00000366764 B4GALNT4Q76KP1 1039 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 CDC37L1Q7L3B6 337 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 MTMR6Q9Y217 621 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 FANCCQ00597 558 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 A0A1W2PQ27 194 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 A0A1W2PQ64 194 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 A0A1W2PQD8 194 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 EYA2O00167 538 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 DEXIO95424 95 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZPR1O75312 459 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 SPECC1Q5M775 1068 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 APPBP2Q92624 585 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 GAS2L3Q86XJ1 694 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 FERMT2Q96AC1 680 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
CDC42BPA-202ENST00000366764 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 CUL5Q93034 780 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 A0A1B0GVL5 298 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 BRD3Q15059 726 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 FAM76AQ8TAV0 307 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 GNA11P29992 359 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 RASSF4Q9H2L5 321 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 SYNRGQ9UMZ2 1314 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 WWC2Q6AWC2 1192 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZSWIM4Q9H7M6 989 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
CDC42BPA-202ENST00000366764 AFMP43652 599 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 MNAT1P51948 309 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 UBXN1Q04323 297 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZNF790Q6PG37 636 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 PLCG2P16885 1265 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 ME3Q16798 604 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 RNF187Q5TA31 235 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 FCHSD1Q86WN1 690 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 PLCD1P51178 756 aa13.34□□□□□ -0.27
CDC42BPA-202ENST00000366764 PFKFB2O60825 505 aa13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 NUP58Q9BVL2 599 aa13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 UTP14CQ5TAP6 766 aaKnown RBP13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.27
CDC42BPA-202ENST00000366764 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 NEURL4Q96JN8 1562 aa13.33□□□□□ -0.28
CDC42BPA-202ENST00000366764 GCKRQ14397 625 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms