RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
MRPL55-212ENST00000366739 SERPINA10Q9UK55 444 aa14.53□□□□□ -0.08
MRPL55-212ENST00000366739 PTCH2Q9Y6C5 1203 aa14.53□□□□□ -0.08
MRPL55-212ENST00000366739 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.09
MRPL55-212ENST00000366739 MAP3K9P80192 1104 aa14.52□□□□□ -0.09
MRPL55-212ENST00000366739 VGLL4Q14135 290 aa14.52□□□□□ -0.09
MRPL55-212ENST00000366739 TAF1CQ15572 869 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-212ENST00000366739 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.09
MRPL55-212ENST00000366739 TMEM106CQ9BVX2 250 aa14.52□□□□□ -0.09
MRPL55-212ENST00000366739 ZFYVE28Q9HCC9 887 aa14.52□□□□□ -0.09
MRPL55-212ENST00000366739 GRM8O00222 908 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-212ENST00000366739 HIBADHP31937 336 aaKnown RBP14.51□□□□□ -0.09
MRPL55-212ENST00000366739 CRKP46108 304 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 GTF2A2P52657 109 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 GRIK5Q16478 980 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
MRPL55-212ENST00000366739 OTUD5Q96G74 571 aa14.51□□□□□ -0.09
MRPL55-212ENST00000366739 FAM84BQ96KN1 310 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-212ENST00000366739 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
MRPL55-212ENST00000366739 UBE4AQ14139 1066 aa14.5□□□□□ -0.09
MRPL55-212ENST00000366739 PUS3Q9BZE2 481 aaKnown RBP14.5□□□□□ -0.09
MRPL55-212ENST00000366739 CSADQ9Y600 493 aa14.5□□□□□ -0.09
MRPL55-212ENST00000366739 CACNB3P54284 484 aa14.49□□□□□ -0.09
MRPL55-212ENST00000366739 ARHGEF6Q15052 776 aa14.49□□□□□ -0.09
MRPL55-212ENST00000366739 SLC4A8Q2Y0W8 1093 aa14.49□□□□□ -0.09
MRPL55-212ENST00000366739 NBPF11Q86T75 865 aa14.49□□□□□ -0.09
MRPL55-212ENST00000366739 ARHGAP39Q9C0H5 1083 aa14.49□□□□□ -0.09
MRPL55-212ENST00000366739 IQSEC3Q9UPP2 1182 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-212ENST00000366739 COLQQ9Y215 455 aaPredicted RBP14.49□□□□□ -0.09
MRPL55-212ENST00000366739 SPDYE5A6NIY4 337 aa14.48□□□□□ -0.09
MRPL55-212ENST00000366739 TNNI2P48788 182 aa14.48□□□□□ -0.09
MRPL55-212ENST00000366739 SH3TC2Q8TF17 1288 aa14.48□□□□□ -0.09
MRPL55-212ENST00000366739 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-212ENST00000366739 SALL2Q9Y467 1007 aaPredicted RBP14.48□□□□□ -0.09
MRPL55-212ENST00000366739 SNCAIPQ9Y6H5 919 aa14.48□□□□□ -0.09
MRPL55-212ENST00000366739 ARAP2Q8WZ64 1704 aa14.48□□□□□ -0.09
MRPL55-212ENST00000366739 CHAF1AQ13111 956 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-212ENST00000366739 SUCLG2Q96I99 432 aa14.47□□□□□ -0.09
MRPL55-212ENST00000366739 ZSWIM8A7E2V4 1837 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 TLR2O60603 784 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 CETPP11597 493 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
MRPL55-212ENST00000366739 FBXO33Q7Z6M2 555 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
MRPL55-212ENST00000366739 KAZALD1Q96I82 304 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
MRPL55-212ENST00000366739 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 H0YGN5 161 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 IRF6O14896 467 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 ALDH1L1O75891 902 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 ECM2O94769 699 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-212ENST00000366739 LACTBP83111 547 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-212ENST00000366739 SLC4A10Q6U841 1118 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 VPS37DQ86XT2 251 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 ERO1BQ86YB8 467 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 WDR63Q8IWG1 891 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 TEKT1Q969V4 418 aa14.45□□□□□ -0.1
MRPL55-212ENST00000366739 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-212ENST00000366739 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 WDHD1O75717 1129 aaPredicted RBP14.44□□□□□ -0.1
MRPL55-212ENST00000366739 HDLBPQ00341 1268 aaKnown RBP14.44□□□□□ -0.1
MRPL55-212ENST00000366739 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 KIF22Q14807 665 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 LRRC24Q50LG9 513 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 TBC1D22AQ8WUA7 517 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 SRCIN1Q9C0H9 1055 aa14.44□□□□□ -0.1
MRPL55-212ENST00000366739 ZCCHC17Q9NP64 241 aaKnown RBP14.44□□□□□ -0.1
MRPL55-212ENST00000366739 FRAT2O75474 233 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-212ENST00000366739 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
MRPL55-212ENST00000366739 CTGFP29279 349 aa14.43□□□□□ -0.1
MRPL55-212ENST00000366739 PPIL2Q13356 520 aa14.43□□□□□ -0.1
MRPL55-212ENST00000366739 APOBEC3HQ6NTF7 200 aaKnown RBP14.43□□□□□ -0.1
MRPL55-212ENST00000366739 FAM83AQ86UY5 434 aa14.43□□□□□ -0.1
MRPL55-212ENST00000366739 ZDHHC15Q96MV8 337 aa14.43□□□□□ -0.1
MRPL55-212ENST00000366739 TMOD2Q9NZR1 351 aa14.43□□□□□ -0.1
MRPL55-212ENST00000366739 CEP290O15078 2479 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 BCAMP50895 628 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 MTFR1Q15390 333 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 CAVIN4Q5BKX8 364 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 METTL24Q5JXM2 366 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 MIGA2Q7L4E1 593 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 VGLL2Q8N8G2 317 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.42□□□□□ -0.1
MRPL55-212ENST00000366739 SHISA4Q96DD7 197 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 BICC1Q9H694 974 aaKnown RBP14.42□□□□□ -0.1
MRPL55-212ENST00000366739 CPA4Q9UI42 421 aa14.42□□□□□ -0.1
MRPL55-212ENST00000366739 GNRH1P01148 92 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 INPP5BP32019 993 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 PRMT2P55345 433 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 FKBP1CQ5VVH2 108 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 DCAF15Q66K64 600 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 C17orf99Q6UX52 265 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 TRIM47Q96LD4 638 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 TRIOBPQ9H2D6 2365 aa14.41□□□□□ -0.1
MRPL55-212ENST00000366739 UTYO14607 1347 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms