RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 USP28Q96RU2 1077 aa20.39■□□□□ 0.85
TRIM11-202ENST00000366699 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
TRIM11-202ENST00000366699 SPATA5Q8NB90 893 aa20.38■□□□□ 0.85
TRIM11-202ENST00000366699 DNAJC25Q9H1X3 360 aa20.38■□□□□ 0.85
TRIM11-202ENST00000366699 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
TRIM11-202ENST00000366699 TRIM5Q9C035 493 aa20.38■□□□□ 0.85
TRIM11-202ENST00000366699 WNK3Q9BYP7 1800 aa20.38■□□□□ 0.85
TRIM11-202ENST00000366699 LRP5O75197 1615 aa20.38■□□□□ 0.85
TRIM11-202ENST00000366699 PLA2G4DQ86XP0 818 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 ZNF652Q9Y2D9 606 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 DOT1LQ8TEK3 1739 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 NUP98P52948 1817 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 C17orf53Q8N3J3 647 aaPredicted RBP20.37■□□□□ 0.85
TRIM11-202ENST00000366699 ACSBG1Q96GR2 724 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 C8orf76Q96K31 380 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 FAM13BQ9NYF5 915 aa20.37■□□□□ 0.85
TRIM11-202ENST00000366699 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 FDPSP14324 419 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 ZNF75DP51815 510 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 ANTXR2P58335 489 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 ZMYM6O95789 1325 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 RTL9Q8NET4 1388 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 KINO60870 393 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 FAM160A1Q05DH4 1040 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 ALX1Q15699 326 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 MTERF4Q7Z6M4 381 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 DRC7Q8IY82 874 aa20.36■□□□□ 0.85
TRIM11-202ENST00000366699 HELBQ8NG08 1087 aaPredicted RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 ANGEL1Q9UNK9 670 aaKnown RBP20.36■□□□□ 0.85
TRIM11-202ENST00000366699 CDKL5O76039 1030 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 ME1P48163 572 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 SNW1Q13573 536 aaKnown RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 STX1AQ16623 288 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 MARCH10Q8NA82 808 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 PYCARDQ9ULZ3 195 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 KAT6BQ8WYB5 2073 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 TCRBV5S4A2TA0A5A2 114 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 BARGINQ6ZT62 677 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 ILDR1Q86SU0 546 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 ENGASEQ8NFI3 743 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 TMEM87BQ96K49 555 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 STRBPQ96SI9 672 aaKnown RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 GPHNQ9NQX3 736 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 RTEL1Q9NZ71 1219 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 ORC3Q9UBD5 711 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
TRIM11-202ENST00000366699 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
TRIM11-202ENST00000366699 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 PTGS1P23219 599 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 BRAPQ7Z569 592 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 GOLPH3LQ9H4A5 285 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
TRIM11-202ENST00000366699 PATL2C9JE40 543 aaKnown RBP20.34■□□□□ 0.85
TRIM11-202ENST00000366699 FBXO18Q8NFZ0 1043 aa20.33■□□□□ 0.85
TRIM11-202ENST00000366699 GNAT2P19087 354 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 RASGRF1Q13972 1273 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 IQCB1Q15051 598 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 ADALQ6DHV7 355 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 CCDC186Q7Z3E2 898 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 FSIP1Q8NA03 581 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 LTBP4Q8N2S1 1624 aa20.33■□□□□ 0.84
TRIM11-202ENST00000366699 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 NTSR2O95665 410 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 CDC25BP30305 580 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 GTF2F1P35269 517 aaKnown RBP eCLIP20.32■□□□□ 0.844e-8■■■■□ 25.5
TRIM11-202ENST00000366699 ITPK1Q13572 414 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 MAGEB6Q8N7X4 407 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 NAPBQ9H115 298 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 SARM1Q6SZW1 724 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 TBC1D10CQ8IV04 446 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 CDC5LQ99459 802 aaKnown RBP20.32■□□□□ 0.84
TRIM11-202ENST00000366699 NACAP1Q9BZK3 213 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 NBPF3Q9H094 633 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 CNNM2Q9H8M5 875 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
TRIM11-202ENST00000366699 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 SH2B2O14492 632 aaPredicted RBP20.31■□□□□ 0.84
TRIM11-202ENST00000366699 METAP2P50579 478 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRIM11-202ENST00000366699 PIP4K2BP78356 416 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 KCNG4Q8TDN1 519 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 MRPS27Q92552 414 aaKnown RBP20.31■□□□□ 0.84
TRIM11-202ENST00000366699 ANO10Q9NW15 660 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 CHAF1AQ13111 956 aaPredicted RBP20.31■□□□□ 0.84
TRIM11-202ENST00000366699 PCDHA7Q9UN72 937 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 SLIT2O94813 1529 aa20.31■□□□□ 0.84
TRIM11-202ENST00000366699 IFNL3Q8IZI9 196 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
TRIM11-202ENST00000366699 YEATS4O95619 227 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms