RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 GBP5Q96PP8 586 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 SDSP20132 328 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 MAP2K2P36507 400 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 CYP26C1Q6V0L0 522 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 I3L4J1 428 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 GNAT2P19087 354 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 PAK2Q13177 524 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 NCAPGQ9BPX3 1015 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 U2AF2P26368 475 aaKnown RBP eCLIP18.77■□□□□ 0.61e-15■■□□□ 11.5
NID1-202ENST00000366595 GNA11P29992 359 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 MCM7P33993 719 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 Q6ZUG5 572 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 TBC1D31Q96DN5 1066 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 ELP1O95163 1332 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 ITIH3Q06033 890 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 HHATQ5VTY9 493 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 TRMT1LQ7Z2T5 733 aaKnown RBP18.77■□□□□ 0.6
NID1-202ENST00000366595 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 FAN1Q9Y2M0 1017 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 STK10O94804 968 aaKnown RBP18.77■□□□□ 0.6
NID1-202ENST00000366595 ZBTB17Q13105 803 aa18.77■□□□□ 0.6
NID1-202ENST00000366595 HVCN1Q96D96 273 aa18.77■□□□□ 0.59
NID1-202ENST00000366595 NUP58Q9BVL2 599 aa18.77■□□□□ 0.59
NID1-202ENST00000366595 C6orf229H3BNL8 230 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 SPOPO43791 374 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 E7EVH7 732 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 GOLGA6BA6NDN3 693 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 CCDC65Q8IXS2 484 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 RAD50Q92878 1312 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 UAP1Q16222 522 aaPredicted RBP18.76■□□□□ 0.59
NID1-202ENST00000366595 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
NID1-202ENST00000366595 SNRKQ9NRH2 765 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 EHBP1L1Q8N3D4 1523 aa18.76■□□□□ 0.59
NID1-202ENST00000366595 TSPYL2Q9H2G4 693 aaPredicted RBP18.75■□□□□ 0.59
NID1-202ENST00000366595 STX10O60499 249 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 LIN9Q5TKA1 542 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 SPDYE3A6NKU9 549 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 IMPACTQ9P2X3 320 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 RRP36Q96EU6 259 aaKnown RBP18.75■□□□□ 0.59
NID1-202ENST00000366595 RPGRIP1Q96KN7 1286 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 NOX5Q96PH1 765 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 FRMD4BQ9Y2L6 1034 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 EPB41P11171 864 aaKnown RBP18.75■□□□□ 0.59
NID1-202ENST00000366595 PDE1AP54750 535 aa18.75■□□□□ 0.59
NID1-202ENST00000366595 DDX27Q96GQ7 796 aaKnown RBP18.75■□□□□ 0.59
NID1-202ENST00000366595 CCDC170Q8IYT3 715 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 AGTPBP1Q9UPW5 1226 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 RNF40O75150 1001 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 Q9H521 79 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 SUDS3Q9H7L9 328 aaPredicted RBP18.74■□□□□ 0.59
NID1-202ENST00000366595 PPFIA3O75145 1194 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 TNFAIP3P21580 790 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 PLCD1P51178 756 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 WDR44Q5JSH3 913 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 ANKRD20A3Q5VUR7 823 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 MIER3Q7Z3K6 550 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 SLC4A4Q9Y6R1 1079 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
NID1-202ENST00000366595 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
NID1-202ENST00000366595 HAUS8Q9BT25 410 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 WIZO95785 1651 aa18.74■□□□□ 0.59
NID1-202ENST00000366595 MAIP1Q8WWC4 291 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 FAM160A1Q05DH4 1040 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 TTC41PQ6P2S7 1318 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 PARP2Q9UGN5 583 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 ERCC3P19447 782 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 STX17P56962 302 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 PRR16Q569H4 304 aa18.73■□□□□ 0.59
NID1-202ENST00000366595 SLC8A3P57103 927 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 RAPGEF1Q13905 1077 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 IGSF22Q8N9C0 903 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 CYP7A1P22680 504 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 ZC3H6P61129 1189 aaKnown RBP18.72■□□□□ 0.59
NID1-202ENST00000366595 TXNDC9O14530 226 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 PDE1CQ14123 709 aaPredicted RBP18.72■□□□□ 0.59
NID1-202ENST00000366595 UTP14CQ5TAP6 766 aaKnown RBP18.72■□□□□ 0.59
NID1-202ENST00000366595 TMTC1Q8IUR5 882 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 NOC4LQ9BVI4 516 aaKnown RBP18.72■□□□□ 0.59
NID1-202ENST00000366595 PSMD6Q15008 389 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 MYRIPQ8NFW9 859 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 SECISBP2LQ93073 1101 aaKnown RBP18.72■□□□□ 0.59
NID1-202ENST00000366595 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
NID1-202ENST00000366595 LUC7L3O95232 432 aaKnown RBP18.71■□□□□ 0.59
NID1-202ENST00000366595 SLC8A1P32418 973 aa18.71■□□□□ 0.59
NID1-202ENST00000366595 SV2BQ7L1I2 683 aa18.71■□□□□ 0.59
NID1-202ENST00000366595 UBE3BQ7Z3V4 1068 aa18.71■□□□□ 0.59
NID1-202ENST00000366595 SYCE1Q8N0S2 351 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms