RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 UBE3CQ15386 1083 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 Q6ZUG5 572 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 SIPA1L3O60292 1781 aaPredicted RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 YDJCA8MPS7 323 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 VEGFAP15692 232 aaPredicted RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 NFIAQ12857 509 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 CUL4AQ13619 759 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 RRP12Q5JTH9 1297 aaKnown RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 BLOC1S2Q6QNY1 142 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 DLK2Q6UY11 383 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 CCDC144CPQ8IYA2 1237 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 AIDAQ96BJ3 306 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 HELLSQ9NRZ9 838 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 TOMM22Q9NS69 142 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 PPEF1O14829 653 aaPredicted RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 FDPSP14324 419 aaKnown RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 ADD1P35611 737 aaKnown RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 ST5P78524 1137 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 FAM47AQ5JRC9 791 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 MB21D2Q8IYB1 491 aaPredicted RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 ATP6V0A2Q9Y487 856 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 hCG_1642624A0A1W2PR95 340 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 CTDNEP1O95476 244 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 EXOSC10Q01780 885 aaKnown RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 GUCY1B3Q02153 619 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 CAVIN4Q5BKX8 364 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 KIAA0825Q8IV33 1275 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 MAPKAPK5Q8IW41 473 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 MPNDQ8N594 471 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 SGIP1Q9BQI5 828 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 CPVLQ9H3G5 476 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 DDX4Q9NQI0 724 aaKnown RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 ZNF277Q9NRM2 450 aaPredicted RBP3.42□□□□□ -1.86
LTN1-201ENST00000361371 GGA1Q9UJY5 639 aa3.42□□□□□ -1.86
LTN1-201ENST00000361371 RPS6KB1P23443 525 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 NAA16Q6N069 864 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.41□□□□□ -1.86
LTN1-201ENST00000361371 ZNF512BQ96KM6 892 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 CRAMP1Q96RY5 1269 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 NAP1L2Q9ULW6 460 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 CYP46A1Q9Y6A2 500 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 XDHP47989 1333 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 PAPPAQ13219 1627 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 BBOX1O75936 387 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 HSP90AA1P07900 732 aaKnown RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 ZKSCAN1P17029 563 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 SYT1P21579 422 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 PLCD1P51178 756 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 RHBDL3P58872 404 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 MAP3K12Q12852 859 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 AOC3Q16853 763 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 DPP8Q6V1X1 898 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 SH3RF3Q8TEJ3 882 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 IL17RAQ96F46 866 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 RBM17Q96I25 401 aaKnown RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 FTOQ9C0B1 505 aaKnown RBP eCLIP3.41□□□□□ -1.86
LTN1-201ENST00000361371 ZSWIM5Q9P217 1185 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 SAP30BPQ9UHR5 308 aaKnown RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 RPAP1Q9BWH6 1393 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 ADAMTS3O15072 1205 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 ANAPC15P60006 121 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 SF3B2Q13435 895 aaKnown RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 BECN1Q14457 450 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 MASTLQ96GX5 879 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 DSCC1Q9BVC3 393 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 GZF1Q9H116 711 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 CHMP5Q9NZZ3 219 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 MTMR7Q9Y216 660 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 U3KPZ7 1027 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 MFSD14BQ5SR56 506 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 DCP1AQ9NPI6 582 aaPredicted RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 LIMCH1Q9UPQ0 1083 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 PRC1O43663 620 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 RAD17O75943 681 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 JAG1P78504 1218 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 CTR9Q6PD62 1173 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 SP8Q8IXZ3 490 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 SHISA4Q96DD7 197 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 ANKRD2Q9GZV1 360 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 HPS5Q9UPZ3 1129 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 DAGLAQ9Y4D2 1042 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 RGL2O15211 777 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 CDC27P30260 824 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 SLC35G1Q2M3R5 365 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 TGFBRAP1Q8WUH2 860 aa3.41□□□□□ -1.86
LTN1-201ENST00000361371 ZC3H12CQ9C0D7 883 aaKnown RBP3.41□□□□□ -1.86
LTN1-201ENST00000361371 ST18O60284 1047 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 SCRN1Q12765 414 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 TM6SF1Q9BZW5 370 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 FAM217BQ9NTX9 383 aaPredicted RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 ASTN2O75129 1339 aaPredicted RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 PATL2C9JE40 543 aaKnown RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 ZNF213O14771 459 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 PDIA3P30101 505 aaKnown RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 MCM4P33991 863 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 BTDP43251 543 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 TSGA10IPQ3SY00 556 aa3.4□□□□□ -1.86
LTN1-201ENST00000361371 DHX32Q7L7V1 743 aaKnown RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 CCDC84Q86UT8 332 aaPredicted RBP3.4□□□□□ -1.86
LTN1-201ENST00000361371 RTFDC1Q9BY42 306 aaPredicted RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms