RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 MNS1Q8NEH6 495 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 PAXBP1Q9Y5B6 917 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 HAND2P61296 217 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 RBM6P78332 1123 aaKnown RBP10.57□□□□□ -0.72
TOP1-201ENST00000361337 SCRN1Q12765 414 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 USPL1Q5W0Q7 1092 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 TRPC5Q9UL62 973 aaPredicted RBP10.57□□□□□ -0.72
TOP1-201ENST00000361337 MED23Q9ULK4 1368 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 C6orf229H3BNL8 230 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 LRRC24Q50LG9 513 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 ZNF446Q9NWS9 450 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
TOP1-201ENST00000361337 SNW1Q13573 536 aaKnown RBP10.56□□□□□ -0.72
TOP1-201ENST00000361337 ERC1Q8IUD2 1116 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 CCAR1Q8IX12 1150 aaKnown RBP10.56□□□□□ -0.72
TOP1-201ENST00000361337 RAI14Q9P0K7 980 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 LRP2BPQ9P2M1 347 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 H3BQV1 296 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 CREBRFQ8IUR6 639 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 ALDH1L1O75891 902 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 IGKV5-2P06315 115 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 SYCP1Q15431 976 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 STOX1Q6ZVD7 989 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
TOP1-201ENST00000361337 USP28Q96RU2 1077 aa10.56□□□□□ -0.72
TOP1-201ENST00000361337 NCOA5Q9HCD5 579 aaKnown RBP10.56□□□□□ -0.72
TOP1-201ENST00000361337 F8W031 263 aaPredicted RBP10.55□□□□□ -0.72
TOP1-201ENST00000361337 CTDNEP1O95476 244 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 CYP21A2P08686 494 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 ITGA6P23229 1130 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 NBPF11Q86T75 865 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 AOPEPQ8N6M6 819 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.723e-10■■■■□ 19.9
TOP1-201ENST00000361337 TERF2Q15554 542 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 MRC1P22897 1456 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
TOP1-201ENST00000361337 ANKRD1Q15327 319 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 CHST3Q7LGC8 479 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 NEK1Q96PY6 1258 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 UTP14AQ9BVJ6 771 aaKnown RBP10.55□□□□□ -0.72
TOP1-201ENST00000361337 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 BABAM1Q9NWV8 329 aa10.55□□□□□ -0.72
TOP1-201ENST00000361337 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
TOP1-201ENST00000361337 GJD4Q96KN9 370 aaPredicted RBP10.54□□□□□ -0.72
TOP1-201ENST00000361337 SRCAPQ6ZRS2 3230 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 CDC25BP30305 580 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 MRFAP1L1Q96HT8 127 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 NOL10Q9BSC4 688 aaKnown RBP10.54□□□□□ -0.72
TOP1-201ENST00000361337 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 TCIRG1Q13488 830 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 ERCC6LQ2NKX8 1250 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
TOP1-201ENST00000361337 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
TOP1-201ENST00000361337 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
TOP1-201ENST00000361337 APOBRQ0VD83 1088 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 STX1AQ16623 288 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 E4F1Q66K89 784 aaPredicted RBP10.53□□□□□ -0.72
TOP1-201ENST00000361337 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 RSPH14Q9UHP6 348 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
TOP1-201ENST00000361337 KRT222Q8N1A0 295 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 ENGASEQ8NFI3 743 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 RPGRQ92834 1020 aaKnown RBP10.53□□□□□ -0.72
TOP1-201ENST00000361337 DEF6Q9H4E7 631 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 GREM2Q9H772 168 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 TJP1Q07157 1748 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 TOGARAM1Q9Y4F4 1720 aa10.53□□□□□ -0.72
TOP1-201ENST00000361337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
TOP1-201ENST00000361337 NSUN7Q8NE18 718 aaKnown RBP10.53□□□□□ -0.72
TOP1-201ENST00000361337 ZNF609O15014 1411 aa10.52□□□□□ -0.72
TOP1-201ENST00000361337 A0A1B0GVL5 298 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 RBM5P52756 815 aaKnown RBP eCLIP10.52□□□□□ -0.738e-6■■■■□ 20.7
TOP1-201ENST00000361337 FSIP1Q8NA03 581 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.73
TOP1-201ENST00000361337 MEGF6O75095 1541 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 PTPDC1A2A3K4 754 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 MINDY4BA8MYZ0 360 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 HIP1O00291 1037 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 BIN1O00499 593 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 HOXB7P09629 217 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 ME1P48163 572 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 PI16Q6UXB8 463 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
TOP1-201ENST00000361337 GPHNQ9NQX3 736 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms