RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 VCX3AQ9NNX9 186 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 PPFIA3O75145 1194 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 PRAM1Q96QH2 718 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 NAPGQ99747 312 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 SLC26A6Q9BXS9 759 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 SMIM24O75264 130 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 RAB3GAP1Q15042 981 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 TMEM67Q5HYA8 995 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 TMEM132EQ6IEE7 984 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 C8orf74Q6P047 294 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 NEK1Q96PY6 1258 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 NAP1L4Q99733 375 aaKnown RBP14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 FAF1Q9UNN5 650 aaPredicted RBP14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 RASSF2P50749 326 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 ATP6V0A2Q9Y487 856 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 CNGA4Q8IV77 575 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 NCOA7Q8NI08 942 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 F13A1P00488 732 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 BIRC2Q13490 618 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 NEK11Q8NG66 645 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 WDR70Q9NW82 654 aa14.78□□□□□ -0.04
SRGAP3-201ENST00000360413 RPL13P26373 211 aaKnown RBP14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 ATP6V1E1P36543 226 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 PPFIA1Q13136 1202 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 CXorf38Q8TB03 319 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 KIF11P52732 1056 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 RUFY4Q6ZNE9 571 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 NECAB1Q8N987 351 aa14.77□□□□□ -0.04
SRGAP3-201ENST00000360413 AKR1B15C9JRZ8 316 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 KMT5BQ4FZB7 885 aa14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 MARCKSP29966 332 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 TMPOP42166 694 aaKnown RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 TTC22Q5TAA0 569 aa14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 MAP3K21Q5TCX8 1036 aa14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 ERBINQ96RT1 1412 aa14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 RFX1P22670 979 aa14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.05
SRGAP3-201ENST00000360413 EIF3DO15371 548 aaKnown RBP eCLIP14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 LRRD1A4D1F6 860 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 ERCC5P28715 1186 aaPredicted RBP14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 PPARDQ03181 441 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 AK9Q5TCS8 1911 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 UQCRFS1P1P0C7P4 283 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 CARD6Q9BX69 1037 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 HIP1RO75146 1068 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 SNX21Q969T3 373 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 FAM13AO94988 1023 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 DMTNQ08495 405 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 GLT8D2Q9H1C3 349 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 UTP14CQ5TAP6 766 aaKnown RBP14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 ATP2A3Q93084 1043 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 FRMD4BQ9Y2L6 1034 aa14.76□□□□□ -0.05
SRGAP3-201ENST00000360413 SNCBQ16143 134 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 STAG1Q8WVM7 1258 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 MRFAP1L1Q96HT8 127 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 KIF14Q15058 1648 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 TAF7Q15545 349 aaPredicted RBP14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 ESR2Q92731 530 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 CCDC8Q9H0W5 538 aaPredicted RBP14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 SPC25Q9HBM1 224 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 TSPY3P0CV98 308 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 TSPY8P0CW00 308 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 SEL1L2Q5TEA6 688 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 ACTN4O43707 911 aaKnown RBP14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 NSMCE1Q8WV22 266 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 KCNG1Q9UIX4 513 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 GON4LQ3T8J9 2241 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 GNAT2P19087 354 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 VWA3BQ502W6 1294 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 STX10O60499 249 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 RASIP1Q5U651 963 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 LRRC43Q8N309 656 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 VEZTQ9HBM0 779 aa14.75□□□□□ -0.05
SRGAP3-201ENST00000360413 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 DBF4Q9UBU7 674 aaPredicted RBP14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 C9orf84Q5VXU9 1444 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 CCDC152Q4G0S7 254 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 LGSNQ5TDP6 509 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 PLCB1Q9NQ66 1216 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms