RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 RPL13P26373 211 aaKnown RBP10.4□□□□□ -0.74
VPS13A-203ENST00000360280 MICAL1Q8TDZ2 1067 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 HIP1RO75146 1068 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 ESR2Q92731 530 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 AKR1B15C9JRZ8 316 aaPredicted RBP10.4□□□□□ -0.74
VPS13A-203ENST00000360280 SMARCA5O60264 1052 aaPredicted RBP10.4□□□□□ -0.74
VPS13A-203ENST00000360280 HSP90AA4PQ58FG1 418 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 CYP26C1Q6V0L0 522 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 USP48Q86UV5 1035 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
VPS13A-203ENST00000360280 LEO1Q8WVC0 666 aaPredicted RBP10.4□□□□□ -0.74
VPS13A-203ENST00000360280 LARSQ9P2J5 1176 aaKnown RBP10.4□□□□□ -0.74
VPS13A-203ENST00000360280 EIF2AQ9BY44 585 aaKnown RBP10.4□□□□□ -0.75
VPS13A-203ENST00000360280 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.75
VPS13A-203ENST00000360280 TRIM4Q9C037 500 aa10.4□□□□□ -0.75
VPS13A-203ENST00000360280 HEATR3Q7Z4Q2 680 aa10.4□□□□□ -0.75
VPS13A-203ENST00000360280 PARP2Q9UGN5 583 aa10.4□□□□□ -0.75
VPS13A-203ENST00000360280 SPTLC2O15270 562 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 OPHN1O60890 802 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 F13A1P00488 732 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 FLIIQ13045 1269 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 RBBP5Q15291 538 aaKnown RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 ANKRD20A3Q5VUR7 823 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 PAK2Q13177 524 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 CXorf38Q8TB03 319 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 CFTRP13569 1480 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 ATP6V1AP38606 617 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 HHATQ5VTY9 493 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 CDC5LQ99459 802 aaKnown RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 STX10O60499 249 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 PFDN1O60925 122 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 KCNH5Q8NCM2 988 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 TSKSQ9UJT2 592 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 SPOPO43791 374 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 RARSP54136 660 aaKnown RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 DBN1Q16643 649 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 DPH6Q7L8W6 267 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 PRDM11Q9NQV5 511 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 KRT2P35908 639 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 NUTM2AQ8IVF1 878 aaPredicted RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 SEPT8Q92599 483 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 DACT1Q9NYF0 836 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 CFAP65Q6ZU64 1925 aaKnown RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 RLBP1P12271 317 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 SYT10Q6XYQ8 523 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 PNMA8AQ86V59 439 aaPredicted RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 KARSQ15046 597 aaKnown RBP10.39□□□□□ -0.75
VPS13A-203ENST00000360280 RTN1Q16799 776 aa10.39□□□□□ -0.75
VPS13A-203ENST00000360280 TRIM75PA6NK02 468 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 PPFIA4O75335 1185 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 TAF12Q16514 161 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 TMX3Q96JJ7 454 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 TRMT1LQ7Z2T5 733 aaKnown RBP10.38□□□□□ -0.75
VPS13A-203ENST00000360280 PPP4R1Q8TF05 950 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 PIK3R4Q99570 1358 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 GOLGA8QA0A0J9YX86 632 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 GOLGA8OA6NCC3 632 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 GOLGA8NF8WBI6 632 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 FAF1Q9UNN5 650 aaPredicted RBP10.38□□□□□ -0.75
VPS13A-203ENST00000360280 LIN9Q5TKA1 542 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RAB17Q9H0T7 212 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RAD50Q92878 1312 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 XRCC6P12956 609 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 SSH1Q8WYL5 1049 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RNF40O75150 1001 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 RILPQ96NA2 401 aa10.38□□□□□ -0.75
VPS13A-203ENST00000360280 TROVE2P10155 538 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 ANKFY1Q9P2R3 1169 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 TRIM68Q6AZZ1 485 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 MYD88Q99836 296 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CALM1P0DP23 149 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CALM2P0DP24 149 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CALM3P0DP25 149 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 CCDC125Q86Z20 511 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 IFNKQ9P0W0 207 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 NSD2O96028 1365 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 MCM10Q7L590 875 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 DRC3Q9H069 523 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 SYCE1Q8N0S2 351 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 PSPC1Q8WXF1 523 aaKnown RBP10.37□□□□□ -0.75
VPS13A-203ENST00000360280 KLF18A0A0U1RQI7 1052 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 NAPAP54920 295 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 VAT1LQ9HCJ6 419 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 ELP1O95163 1332 aa10.37□□□□□ -0.75
VPS13A-203ENST00000360280 MYL5Q02045 173 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms