RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 A0A087WWV3 80 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 ACTN2P35609 894 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 ME1P48163 572 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
UBAP1-202ENST00000359544 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 BTAF1O14981 1849 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
UBAP1-202ENST00000359544 AACSQ86V21 672 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 CCDC34Q96HJ3 373 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 LRRC4BQ9NT99 713 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
UBAP1-202ENST00000359544 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
UBAP1-202ENST00000359544 GOLGA6L9A6NEM1 432 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 TRIM66O15016 1216 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 LMAN1P49257 510 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
UBAP1-202ENST00000359544 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
UBAP1-202ENST00000359544 USP28Q96RU2 1077 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 ADAM21Q9UKJ8 722 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 A0A0D9SFI3 127 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 DNAAF4Q8WXU2 420 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 NEK1Q96PY6 1258 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 GEMIN8Q9NWZ8 242 aaKnown RBP17.22■□□□□ 0.35
UBAP1-202ENST00000359544 LCMT1Q9UIC8 334 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 ASAP1Q9ULH1 1129 aa17.22■□□□□ 0.35
UBAP1-202ENST00000359544 PLSCR1O15162 318 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 CBFA2T2O43439 604 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 GTF2A1P52655 376 aaPredicted RBP17.21■□□□□ 0.35
UBAP1-202ENST00000359544 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
UBAP1-202ENST00000359544 DPCR1Q3MIW9 517 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 A0A1W2PQ27 194 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 A0A1W2PQ64 194 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 A0A1W2PQD8 194 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
UBAP1-202ENST00000359544 ICE2Q659A1 982 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 Q6ZUG5 572 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 FUT8Q9BYC5 575 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 BRMS1Q9HCU9 246 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 TMOD3Q9NYL9 352 aa17.21■□□□□ 0.35
UBAP1-202ENST00000359544 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 USPL1Q5W0Q7 1092 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 RSRC2Q7L4I2 434 aaKnown RBP17.2■□□□□ 0.34
UBAP1-202ENST00000359544 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 NLRP12P59046 1061 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 MAP3K9P80192 1104 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 FANCCQ00597 558 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 CERS3Q8IU89 383 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 GOLGA1Q92805 767 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBAP1-202ENST00000359544 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
UBAP1-202ENST00000359544 CCDC151A5D8V7 595 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 IKBKBO14920 756 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 ALDH1L1O75891 902 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 SCRN1Q12765 414 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 BRD3Q15059 726 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 PDGFDQ9GZP0 370 aaPredicted RBP17.19■□□□□ 0.34
UBAP1-202ENST00000359544 PFKFB2O60825 505 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 CABP4P57796 275 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 PARD6BQ9BYG5 372 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 MRFAP1Q9Y605 127 aa17.19■□□□□ 0.34
UBAP1-202ENST00000359544 RGS22Q8NE09 1264 aa17.18■□□□□ 0.34
UBAP1-202ENST00000359544 ERCC4Q92889 916 aaPredicted RBP17.18■□□□□ 0.34
UBAP1-202ENST00000359544 ARHGAP6O43182 974 aa17.18■□□□□ 0.34
UBAP1-202ENST00000359544 TAF5LO75529 589 aa17.18■□□□□ 0.34
UBAP1-202ENST00000359544 SMIM5Q71RC9 77 aa17.18■□□□□ 0.34
UBAP1-202ENST00000359544 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
UBAP1-202ENST00000359544 UTP14AQ9BVJ6 771 aaKnown RBP17.18■□□□□ 0.34
UBAP1-202ENST00000359544 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
UBAP1-202ENST00000359544 RPS6KA5O75582 802 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 MAGEA9P43362 315 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 NCAPHQ15003 741 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 LONRF2Q1L5Z9 754 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 ITGB4P16144 1822 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 VWA3AA6NCI4 1184 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 FANCGO15287 622 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 RNMTO43148 476 aaKnown RBP17.17■□□□□ 0.34
UBAP1-202ENST00000359544 SLC3A2P08195 630 aaKnown RBP17.17■□□□□ 0.34
UBAP1-202ENST00000359544 TXLNAP40222 546 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
UBAP1-202ENST00000359544 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms