RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 MYL5Q02045 173 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 NUTM2DQ5VT03 806 aaPredicted RBP15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 RTEL1Q9NZ71 1219 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 TAF6LQ9Y6J9 622 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 JCADQ9P266 1359 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 KLHL33A6NCF5 533 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 TMEM232C9JQI7 657 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 TC2NQ8N9U0 490 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 MIS18AQ9NYP9 233 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 TSPYL4Q9UJ04 414 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 IGSF22Q8N9C0 903 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 XAGE2Q96GT9 111 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 RHOXF2BP0C7M4 288 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 BIRC2Q13490 618 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 KRT32Q14532 448 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 KARSQ15046 597 aaKnown RBP15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 RHOXF2Q9BQY4 288 aa15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 MRPL44Q9H9J2 332 aaKnown RBP15.21■□□□□ 0.03
SPTSSB-201ENST00000359175 NUTM2FA1L443 756 aa15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 CCDC175P0C221 793 aa15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 GPATCH3Q96I76 525 aa15.21■□□□□ 0.02
SPTSSB-201ENST00000359175 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 ERCC3P19447 782 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 IRAK1P51617 712 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 IRX2Q9BZI1 471 aaPredicted RBP15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 FNTAP49354 379 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 MTX1Q13505 466 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
SPTSSB-201ENST00000359175 CHUKO15111 745 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 ZNF202O95125 648 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 CLASRPQ8N2M8 674 aaKnown RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 MED23Q9ULK4 1368 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 CTAGE15A4D2H0 777 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 KIF5CO60282 957 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 CTAGE8P0CG41 777 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 WHAMMP3Q1A5X7 153 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 SKIDA1Q1XH10 827 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 KIF4BQ2VIQ3 1234 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 CTAGE6Q86UF2 777 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 CTAGE4Q8IX94 777 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 LINC00301Q8NCQ3 95 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 VEZTQ9HBM0 779 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 TUBE1Q9UJT0 475 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 HPCAL4Q9UM19 191 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 TMCO5BA8MYB1 307 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 PFKFB2O60825 505 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 FSBPO95073 299 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 DESI2Q9BSY9 194 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
SPTSSB-201ENST00000359175 Q6ZUG5 572 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 SIL1Q9H173 461 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 PAX7P23759 505 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 IRX1P78414 480 aaPredicted RBP15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 NAIF1Q69YI7 327 aaPredicted RBP15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 NME9Q86XW9 330 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 FAM76AQ8TAV0 307 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 NEK1Q96PY6 1258 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 CAPN7Q9Y6W3 813 aa15.18■□□□□ 0.02
SPTSSB-201ENST00000359175 SHTN1A0MZ66 631 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 CTAGE9A4FU28 777 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 SPECC1LQ69YQ0 1117 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 PDILTQ8N807 584 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 N4BP2L2Q92802 583 aaPredicted RBP15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 FANCLQ9NW38 375 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 SBNO1A3KN83 1393 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 SH3BP1Q9Y3L3 701 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 A0A0D9SFI3 127 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 NEBLO76041 1014 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 MCM3P25205 808 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 PPFIA1Q13136 1202 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 WLSQ5T9L3 541 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 BCAS4Q8TDM0 211 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 ADGRG1Q9Y653 693 aa15.17■□□□□ 0.02
SPTSSB-201ENST00000359175 ANKRD33BA6NCL7 494 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms