RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
GABPB1-202ENST00000359031 RASGRF1Q13972 1273 aa17.55■□□□□ 0.4
GABPB1-202ENST00000359031 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
GABPB1-202ENST00000359031 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
GABPB1-202ENST00000359031 RBSNQ9H1K0 784 aa17.55■□□□□ 0.4
GABPB1-202ENST00000359031 DTNBO60941 627 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 CHRNDQ07001 517 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 RALYLQ86SE5 291 aaKnown RBP17.54■□□□□ 0.4
GABPB1-202ENST00000359031 PPP1R9BQ96SB3 815 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 TSPY26PQ9H489 355 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 C4AP0C0L4 1744 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 C4BP0C0L5 1744 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 SALL1Q9NSC2 1324 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 HAND2P61296 217 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 ERFEQ4G0M1 354 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
GABPB1-202ENST00000359031 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 SCAND2PQ9GZW5 306 aaPredicted RBP17.54■□□□□ 0.4
GABPB1-202ENST00000359031 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
GABPB1-202ENST00000359031 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
GABPB1-202ENST00000359031 H3BQV1 296 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 PRC1O43663 620 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 PDIA3P30101 505 aaKnown RBP17.53■□□□□ 0.4
GABPB1-202ENST00000359031 RESTQ13127 1097 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 ALX1Q15699 326 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 SLC10A5Q5PT55 438 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
GABPB1-202ENST00000359031 C1QTNF8P60827 252 aa17.52■□□□□ 0.4
GABPB1-202ENST00000359031 FERMT3Q86UX7 667 aa17.52■□□□□ 0.4
GABPB1-202ENST00000359031 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
GABPB1-202ENST00000359031 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.39
GABPB1-202ENST00000359031 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
GABPB1-202ENST00000359031 TRDNQ13061 729 aa17.51■□□□□ 0.39
GABPB1-202ENST00000359031 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
GABPB1-202ENST00000359031 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
GABPB1-202ENST00000359031 STRBPQ96SI9 672 aaKnown RBP17.51■□□□□ 0.39
GABPB1-202ENST00000359031 MYH13Q9UKX3 1938 aa17.51■□□□□ 0.39
GABPB1-202ENST00000359031 GPR162Q16538 588 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 CHST3Q7LGC8 479 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 TRIM44Q96DX7 344 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-202ENST00000359031 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-202ENST00000359031 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 TAF1P21675 1872 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
GABPB1-202ENST00000359031 GNAT2P19087 354 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 ANTXR2P58335 489 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 CCT2P78371 535 aaKnown RBP17.5■□□□□ 0.39
GABPB1-202ENST00000359031 UBE4AQ14139 1066 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 TBC1D9BQ66K14 1250 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 NBPF3Q9H094 633 aa17.5■□□□□ 0.39
GABPB1-202ENST00000359031 CCNL1Q9UK58 526 aaPredicted RBP17.5■□□□□ 0.39
GABPB1-202ENST00000359031 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 SNAP23O00161 211 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 APPP05067 770 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 BCAMP50895 628 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
GABPB1-202ENST00000359031 GNL3LQ9NVN8 582 aaKnown RBP17.49■□□□□ 0.39
GABPB1-202ENST00000359031 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
GABPB1-202ENST00000359031 MAST2Q6P0Q8 1798 aa17.49■□□□□ 0.39
GABPB1-202ENST00000359031 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 GOLGA8BA8MQT2 603 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 PATL2C9JE40 543 aaKnown RBP17.48■□□□□ 0.39
GABPB1-202ENST00000359031 GNPATO15228 680 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 MBD4O95243 580 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 GTF2E1P29083 439 aaPredicted RBP17.48■□□□□ 0.39
GABPB1-202ENST00000359031 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 SPATA32Q96LK8 384 aa17.48■□□□□ 0.39
GABPB1-202ENST00000359031 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
GABPB1-202ENST00000359031 ZPR1O75312 459 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 KCNQ4P56696 695 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 ATL3Q6DD88 541 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 LEO1Q8WVC0 666 aaPredicted RBP17.47■□□□□ 0.39
GABPB1-202ENST00000359031 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
GABPB1-202ENST00000359031 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 TMEM87BQ96K49 555 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 NAPBQ9H115 298 aa17.47■□□□□ 0.39
GABPB1-202ENST00000359031 EPB41L4AQ9HCS5 686 aaPredicted RBP17.47■□□□□ 0.39
GABPB1-202ENST00000359031 ANGEL1Q9UNK9 670 aaKnown RBP17.47■□□□□ 0.39
GABPB1-202ENST00000359031 ECM29Q5VYK3 1845 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.39
GABPB1-202ENST00000359031 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
GABPB1-202ENST00000359031 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
GABPB1-202ENST00000359031 IFNL3Q8IZI9 196 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 PDLIM2Q96JY6 352 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
GABPB1-202ENST00000359031 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
GABPB1-202ENST00000359031 HPS5Q9UPZ3 1129 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms