RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 PAXBP1Q9Y5B6 917 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 MAST3O60307 1309 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 LEKR1Q6ZMV7 388 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
COL20A1-201ENST00000358894 CNNM2Q9H8M5 875 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
COL20A1-201ENST00000358894 ANKIB1Q9P2G1 1089 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 PYCARDQ9ULZ3 195 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 MRVI1Q9Y6F6 885 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 TSPY2A6NKD2 308 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 PDIA3P30101 505 aaKnown RBP14.08□□□□□ -0.16
COL20A1-201ENST00000358894 TOB2Q14106 344 aaPredicted RBP14.08□□□□□ -0.16
COL20A1-201ENST00000358894 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
COL20A1-201ENST00000358894 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 CTDSPL2Q05D32 466 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ARHGAP29Q52LW3 1261 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 CCDC150Q8NCX0 1101 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ESR2Q92731 530 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 NRBP1Q9UHY1 535 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 H0YHG0 523 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ZSCAN12O43309 604 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ATL3Q6DD88 541 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 CDK5RAP3Q96JB5 506 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ZPR1O75312 459 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ZMYM1Q5SVZ6 1142 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 MYRIPQ8NFW9 859 aa14.07□□□□□ -0.16
COL20A1-201ENST00000358894 ZNF202O95125 648 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-201ENST00000358894 MEX3CQ5U5Q3 659 aaKnown RBP14.06□□□□□ -0.16
COL20A1-201ENST00000358894 PRDM1O75626 825 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 DDB1Q16531 1140 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 IFIT1BQ5T764 474 aaKnown RBP14.06□□□□□ -0.16
COL20A1-201ENST00000358894 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 MYSM1Q5VVJ2 828 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 KRT40Q6A162 431 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 GPATCH11Q8N954 259 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 DHX58Q96C10 678 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 SPATA31D1Q6ZQQ2 1576 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 STIM1Q13586 685 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 CAGE1Q8TC20 777 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 ZNF274Q96GC6 653 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-201ENST00000358894 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 GREM2Q9H772 168 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 SLAIN2Q9P270 581 aa14.06□□□□□ -0.16
COL20A1-201ENST00000358894 PUM3Q15397 648 aaKnown RBP14.05□□□□□ -0.16
COL20A1-201ENST00000358894 DEF6Q9H4E7 631 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 PDE8AO60658 829 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 STX17P56962 302 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 IKQ13123 557 aaPredicted RBP14.05□□□□□ -0.16
COL20A1-201ENST00000358894 TMEM87AQ8NBN3 555 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 M0R2C6 588 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 GNG11P61952 73 aa14.05□□□□□ -0.16
COL20A1-201ENST00000358894 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 PCDHA7Q9UN72 937 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 ELP1O95163 1332 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 SALL3Q9BXA9 1300 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 SSBP05455 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL20A1-201ENST00000358894 STX8Q9UNK0 236 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 hCG_1642624A0A1W2PR95 340 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 DMTNQ08495 405 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 DIS3L2Q8IYB7 885 aaKnown RBP14.04□□□□□ -0.16
COL20A1-201ENST00000358894 CMTR1Q8N1G2 835 aaKnown RBP14.04□□□□□ -0.16
COL20A1-201ENST00000358894 TMTC2Q8N394 836 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 KCNJ14Q9UNX9 436 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 RPAP1Q9BWH6 1393 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-201ENST00000358894 MAGEB6P1A0A0J9YX57 407 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-201ENST00000358894 AK7Q96M32 723 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
COL20A1-201ENST00000358894 TMCO3Q6UWJ1 677 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 SYT10Q6XYQ8 523 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ZBTB38Q8NAP3 1195 aaPredicted RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 TRIM75PA6NK02 468 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 PHKA1P46020 1223 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ZNF444Q8N0Y2 327 aaPredicted RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 KRI1Q8N9T8 703 aaKnown RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 IPO4Q8TEX9 1081 aaKnown RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ZHX3Q9H4I2 956 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 GJB4Q9NTQ9 266 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
COL20A1-201ENST00000358894 CLIC4Q9Y696 253 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 CEMIPQ8WUJ3 1361 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 ADGRL3Q9HAR2 1447 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 CTSWP56202 376 aa14.03□□□□□ -0.16
COL20A1-201ENST00000358894 LPIN2Q92539 896 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms