RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TACO1Q9BSH4 297 aaKnown RBP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 NUCB1Q02818 461 aa12.56□□□□□ -0.4
COL11A1-202ENST00000358392 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
COL11A1-202ENST00000358392 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 TRIM75PA6NK02 468 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 AKR1B15C9JRZ8 316 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-202ENST00000358392 INPP5BP32019 993 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
COL11A1-202ENST00000358392 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 C17orf53Q8N3J3 647 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-202ENST00000358392 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
COL11A1-202ENST00000358392 VWA3AA6NCI4 1184 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 MAGEB6P1A0A0J9YX57 407 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 A0A1B0GUA9 196 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 GOLGA6CA6NDK9 693 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 GOLGA6DP0CG33 693 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 ZNF174Q15697 407 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 MAEAQ7L5Y9 396 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 GOLGA6AQ9NYA3 693 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 CHPF2Q9P2E5 772 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 CHMP2AO43633 222 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 ATP5DP30049 168 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 B4GALNT4Q76KP1 1039 aa12.55□□□□□ -0.4
COL11A1-202ENST00000358392 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-202ENST00000358392 ST5P78524 1137 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 USTQ9Y2C2 406 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 DAPK3O43293 454 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 BIRC3Q13489 604 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 NAA16Q6N069 864 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 C8orf74Q6P047 294 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 MAGEB6Q8N7X4 407 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 ARFGAP2Q8N6H7 521 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 MEIS3Q99687 375 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 CUL4BQ13620 913 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 CCDC62Q6P9F0 684 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 NBPF5PQ86XG9 351 aaPredicted RBP12.54□□□□□ -0.4
COL11A1-202ENST00000358392 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 BMP15O95972 392 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 AK2P54819 239 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 KLHL7Q8IXQ5 586 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 TBC1D31Q96DN5 1066 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
COL11A1-202ENST00000358392 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 FBLN1P23142 703 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 MAN1A1P33908 653 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 HS2ST1Q7LGA3 356 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 MSANTD4Q8NCY6 345 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 ELF2Q15723 593 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 CASC4Q6P4E1 433 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 PRR16Q569H4 304 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 BACH1O14867 736 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 TNFAIP3P21580 790 aa12.53□□□□□ -0.4
COL11A1-202ENST00000358392 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.4
COL11A1-202ENST00000358392 TRAF5O00463 557 aa12.52□□□□□ -0.4
COL11A1-202ENST00000358392 NAPGQ99747 312 aaPredicted RBP12.52□□□□□ -0.4
COL11A1-202ENST00000358392 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.4
COL11A1-202ENST00000358392 PIK3R4Q99570 1358 aa12.52□□□□□ -0.4
COL11A1-202ENST00000358392 VSIG1Q86XK7 387 aa12.52□□□□□ -0.4
COL11A1-202ENST00000358392 CARD6Q9BX69 1037 aa12.52□□□□□ -0.4
COL11A1-202ENST00000358392 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
COL11A1-202ENST00000358392 GDAP1L1Q96MZ0 367 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
COL11A1-202ENST00000358392 FOXO3O43524 673 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 ASIC2Q16515 512 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 ANKRD24Q8TF21 1146 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 RILPQ96NA2 401 aa12.52□□□□□ -0.41
COL11A1-202ENST00000358392 PAG1Q9NWQ8 432 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms