RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 GRIN3BO60391 1043 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 APPP05067 770 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 TERF2Q15554 542 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 SYAP1Q96A49 352 aaPredicted RBP12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 DDX41Q9UJV9 622 aaKnown RBP12.76□□□□□ -0.37
HIST4H4-201ENST00000358064 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 KRT222Q8N1A0 295 aa12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 RAD50Q92878 1312 aa12.75□□□□□ -0.37
HIST4H4-201ENST00000358064 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 NPR1P16066 1061 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 FOXO4P98177 505 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 TMED8Q6PL24 325 aaPredicted RBP12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 UBXN4Q92575 508 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 HMMRO75330 724 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 ATP8B2P98198 1209 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 LMBR1LQ6UX01 489 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
HIST4H4-201ENST00000358064 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 GRXCR2A6NFK2 248 aa12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 PDE8AO60658 829 aa12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 HDAC1Q13547 482 aaPredicted RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
HIST4H4-201ENST00000358064 CTSWP56202 376 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 MTX1Q13505 466 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 RIC1Q4ADV7 1423 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 C21orf2O43822 256 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 CTNNA3Q9UI47 895 aa12.72□□□□□ -0.37
HIST4H4-201ENST00000358064 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 TTLL11Q8NHH1 800 aa12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 SSH3Q8TE77 659 aa12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 MYCBPQ99417 103 aaPredicted RBP12.71□□□□□ -0.37
HIST4H4-201ENST00000358064 LAMB2P55268 1798 aa12.71□□□□□ -0.38
HIST4H4-201ENST00000358064 CSF1RP07333 972 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 MYH3P11055 1940 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 ERCC3P19447 782 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 RNF20Q5VTR2 975 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 GREM2Q9H772 168 aa12.7□□□□□ -0.38
HIST4H4-201ENST00000358064 CLSTN1O94985 981 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
HIST4H4-201ENST00000358064 REC8O95072 547 aa12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 CAPN2P17655 700 aa12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 ITGA6P23229 1130 aa12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 MYSM1Q5VVJ2 828 aa12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
HIST4H4-201ENST00000358064 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms