RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FANCCQ00597 558 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 STXBP4Q6ZWJ1 553 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ADAM21Q9UKJ8 722 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ARHGEF25Q86VW2 580 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CUEDC2Q9H467 287 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 TRIM21P19474 475 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ARHGAP24Q8N264 748 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF518AQ6AHZ1 1483 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 SLC26A4O43511 780 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 NNTQ13423 1086 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PRDM10Q9NQV6 1147 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 MTX1Q13505 466 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 TSNAXIP1Q2TAA8 658 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF662Q6ZS27 426 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CATIPQ7Z7H3 387 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 A1CFQ9NQ94 594 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 GOLGA6BA6NDN3 693 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 HNRNPH2P55795 449 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CFAP221Q4G0U5 840 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC114Q96M63 670 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PCMTD1Q96MG8 357 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 DONSONQ9NYP3 566 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 MRVI1Q9Y6F6 885 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PRLRP16471 622 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 NCBP1Q09161 790 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 IQCA1Q86XH1 822 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 SLC12A7Q9Y666 1083 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CDK13Q14004 1512 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 STARD3NLO95772 234 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 LACTBP83111 547 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 SPECC1Q5M775 1068 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 NEUROD6Q96NK8 337 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 RAB3IPQ96QF0 476 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 FOXP1Q9H334 677 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PPP2R2CQ9Y2T4 447 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 SAR1BQ9Y6B6 198 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 IL13P35225 146 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CUL1Q13616 776 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ELF2Q15723 593 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PFKFB2O60825 505 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ATP5HO75947 161 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PPCSQ9HAB8 311 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CABP2Q9NPB3 220 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CLCN6P51797 869 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 RNF10Q8N5U6 811 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 LZICQ8WZA0 190 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ST5P78524 1137 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 C1orf131Q8NDD1 294 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 PPP1R13BQ96KQ4 1090 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 TCP11L1Q9NUJ3 509 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 ARMC2Q8NEN0 867 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CACTINQ8WUQ7 758 aaKnown RBP4.64□□□□□ -1.67
SYNE2-204ENST00000358025 MTMR6Q9Y217 621 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CFAP73A6NFT4 308 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 VTI1AQ96AJ9 217 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 SNX14Q9Y5W7 946 aa4.64□□□□□ -1.67
SYNE2-204ENST00000358025 CORO7P57737 925 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CETN1Q12798 172 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 AFAP1Q8N556 730 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 C8orf58Q8NAV2 365 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 C19orf44Q9H6X5 657 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ADGRF5Q8IZF2 1346 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 TULP2O00295 520 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 DAAM1Q9Y4D1 1078 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ATXN2Q99700 1313 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SLC27A2O14975 620 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 VCX3BQ9H321 246 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 RAI14Q9P0K7 980 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 RAD21O60216 631 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 HSPA6P17066 643 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 NYAP1Q6ZVC0 841 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SPATA24Q86W54 205 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 LTV1Q96GA3 475 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 MAML3Q96JK9 1138 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 EXOC6BQ9Y2D4 811 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 RPAP1Q9BWH6 1393 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 MAP3K12Q12852 859 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 FAM210AQ96ND0 272 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 HNRNPCL1O60812 293 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 TEX9Q8N6V9 391 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 NUP88Q99567 741 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 KCNH3Q9ULD8 1083 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CFAP65Q6ZU64 1925 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF213O14771 459 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF215Q9UL58 517 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SLC39A14Q15043 492 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SYT10Q6XYQ8 523 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 DTNBP1Q96EV8 351 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.63□□□□□ -1.672e-6■■■■□ 25.6
SYNE2-204ENST00000358025 EIF3CLB5ME19 914 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 IRX4P78413 519 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 EIF3CQ99613 913 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 CENPHQ9H3R5 247 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 DIS3Q9Y2L1 958 aaKnown RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ANO9A1A5B4 782 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 LAD1O00515 517 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ZEB2O60315 1214 aa4.63□□□□□ -1.67
SYNE2-204ENST00000358025 SPINK5Q9NQ38 1064 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-204ENST00000358025 ERBB4Q15303 1308 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms