RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 DKK3Q9UBP4 350 aa5.24□□□□□ -1.57
SYNE2-203ENST00000357395 KDM4AO75164 1064 aa5.24□□□□□ -1.57
SYNE2-203ENST00000357395 ICA1Q05084 483 aa5.24□□□□□ -1.57
SYNE2-203ENST00000357395 NFE2L2Q16236 605 aa5.24□□□□□ -1.57
SYNE2-203ENST00000357395 MKRN3Q13064 507 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 SCHIP1Q9P0W5 487 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 ATXN2Q99700 1313 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 NUGGCQ68CJ6 796 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 OPTNQ96CV9 577 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CETN3O15182 167 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RRP7AQ9Y3A4 280 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CD2APQ9Y5K6 639 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 LRRC8BQ6P9F7 803 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 PANK1Q8TE04 598 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RRAGDQ9NQL2 400 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RAPGEF2Q9Y4G8 1499 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CCDC169A6NNP5 214 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CROCCP3Q8IVE0 287 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 KPNB1Q14974 876 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 EMBQ6PCB8 327 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 GLT8D2Q9H1C3 349 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 ANGPTL2Q9UKU9 493 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 FRMD4BQ9Y2L6 1034 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 TTC41PQ6P2S7 1318 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 GLE1Q53GS7 698 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 TEDDM1Q5T9Z0 273 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 TEX11Q8IYF3 940 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 PHLPP2Q6ZVD8 1323 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 PSMA7O14818 248 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 PRR23CQ6ZRP0 262 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RAB17Q9H0T7 212 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 GNL3LQ9NVN8 582 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RILPL1Q5EBL4 403 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 HOOK2Q96ED9 719 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CFAP36Q96G28 342 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 ADAMTS8Q9UP79 889 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 GRM1Q13255 1194 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 NONOQ15233 471 aaKnown RBP eCLIP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 ADRM1Q16186 407 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 MAP7D3Q8IWC1 876 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CCDC69A6NI79 296 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 MRPS35P82673 323 aaKnown RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 ATF7IPQ6VMQ6 1270 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CUL3Q13618 768 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RSPH10B2B2RC85 870 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 RSPH10BP0C881 870 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 KIF23Q02241 960 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-203ENST00000357395 CCDC186Q7Z3E2 898 aa5.23□□□□□ -1.57
SYNE2-203ENST00000357395 MYL1P05976 194 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 SNX16P57768 344 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 PPP2R3AQ06190 1150 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 HYOU1Q9Y4L1 999 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ALDH1L1O75891 902 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ST13P5Q8NFI4 369 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 KIF1BPQ96EK5 621 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 TRIM15Q9C019 465 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 MAGEF1Q9HAY2 307 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 UBTFL1P0CB47 393 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 HOMER2Q9NSB8 354 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ST5P78524 1137 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 SIL1Q9H173 461 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 VIPAS39Q9H9C1 493 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 STX6O43752 255 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 FLOT2Q14254 428 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 CNKSR2Q8WXI2 1034 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 KRT23Q9C075 422 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 GOLGA8IPA6NC78 632 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 BLOC1S2Q6QNY1 142 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 CYP26C1Q6V0L0 522 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 PALM2Q8IXS6 379 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 PUS7Q96PZ0 661 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 FIBPO43427 364 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 KRT6AP02538 564 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 KRT6BP04259 564 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 PHBP35232 272 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 PRM3Q9NNZ6 103 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 SLC30A9Q6PML9 568 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 SESTD1Q86VW0 696 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 CTAGE3PQ8IX95 158 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 TCP1P17987 556 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 LIN7AO14910 233 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 HOXB6P17509 224 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 NEK2P51955 445 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 INAQ16352 499 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 RGS22Q8NE09 1264 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 KLHDC4Q8TBB5 520 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ABCD1P33897 745 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 MXRA7P84157 204 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ARHGEF9O43307 516 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ANXA13P27216 316 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 HSPA9P38646 679 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 ILF2Q12905 390 aaKnown RBP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 HLTFQ14527 1009 aaKnown RBP eCLIP5.22□□□□□ -1.57
SYNE2-203ENST00000357395 EP400NLQ6ZTU2 488 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 TRIM58Q8NG06 486 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 I3L4J1 428 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 CALCOCO2Q13137 446 aa5.22□□□□□ -1.57
SYNE2-203ENST00000357395 NFXL1Q6ZNB6 911 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms