RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 PRIMPOLQ96LW4 560 aa17.49■□□□□ 0.39
STRN3-201ENST00000355683 XPO4Q9C0E2 1151 aaKnown RBP17.49■□□□□ 0.39
STRN3-201ENST00000355683 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
STRN3-201ENST00000355683 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
STRN3-201ENST00000355683 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
STRN3-201ENST00000355683 M0R2C6 588 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 PRKAB2O43741 272 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 CDC25AP30304 524 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 PHKA1P46020 1223 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
STRN3-201ENST00000355683 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 POLA2Q14181 598 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 CERKQ8TCT0 537 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 DESI2Q9BSY9 194 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 CDKL5O76039 1030 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 ZNF202O95125 648 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
STRN3-201ENST00000355683 ATP5JP18859 108 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 FAM98CQ17RN3 349 aaKnown RBP17.48■□□□□ 0.39
STRN3-201ENST00000355683 DPCR1Q3MIW9 517 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 ZSCAN25Q6NSZ9 544 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 PLEKHA4Q9H4M7 779 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
STRN3-201ENST00000355683 TSPY2A6NKD2 308 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 POLR2DO15514 142 aaKnown RBP17.47■□□□□ 0.39
STRN3-201ENST00000355683 SCARF1Q14162 830 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 H0YHG0 523 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 CASP1P29466 404 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 BCAMP50895 628 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 SLC5A1P13866 664 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 DDIT3P35638 169 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 ADKP55263 362 aaKnown RBP17.47■□□□□ 0.39
STRN3-201ENST00000355683 MCM6Q14566 821 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 C1orf167Q5SNV9 1468 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 RUFY1Q96T51 708 aa17.47■□□□□ 0.39
STRN3-201ENST00000355683 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 UBE2Q2LH0YL09 131 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 IDEP14735 1019 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 CCDC12Q8WUD4 166 aaPredicted RBP17.46■□□□□ 0.39
STRN3-201ENST00000355683 GDAP1L1Q96MZ0 367 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 ANKARQ7Z5J8 1434 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 PPLO60437 1756 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 ADCY9O60503 1353 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
STRN3-201ENST00000355683 FAM160A1Q05DH4 1040 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 CENPHQ9H3R5 247 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
STRN3-201ENST00000355683 SMTNL1A8MU46 457 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 MCM7P33993 719 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.38
STRN3-201ENST00000355683 RTN1Q16799 776 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 LEKR1Q6ZMV7 388 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 NUP88Q99567 741 aaPredicted RBP17.46■□□□□ 0.38
STRN3-201ENST00000355683 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 USP21Q9UK80 565 aa17.46■□□□□ 0.38
STRN3-201ENST00000355683 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.38
STRN3-201ENST00000355683 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 KRT40Q6A162 431 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 CCDC70Q6NSX1 233 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 SMYD4Q8IYR2 804 aaPredicted RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
STRN3-201ENST00000355683 EIF5P55010 431 aaKnown RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 AMOTL1Q8IY63 956 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 SMAP1Q8IYB5 467 aaPredicted RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 TTC14Q96N46 770 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 GYG1P46976 350 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 STOX1Q6ZVD7 989 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
STRN3-201ENST00000355683 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
STRN3-201ENST00000355683 PLCD3Q8N3E9 789 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
STRN3-201ENST00000355683 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 MAST3O60307 1309 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 LAMC1P11047 1609 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 DZIP1Q86YF9 867 aaKnown RBP17.44■□□□□ 0.38
STRN3-201ENST00000355683 BLZF1Q9H2G9 400 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 MPHOSPH10O00566 681 aaKnown RBP17.44■□□□□ 0.38
STRN3-201ENST00000355683 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
STRN3-201ENST00000355683 ERCC6LQ2NKX8 1250 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
STRN3-201ENST00000355683 DIS3L2Q8IYB7 885 aaKnown RBP17.44■□□□□ 0.38
STRN3-201ENST00000355683 USP27XA6NNY8 438 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 HLFQ16534 295 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
STRN3-201ENST00000355683 MYRIPQ8NFW9 859 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 CRB1P82279 1406 aa17.43■□□□□ 0.38
STRN3-201ENST00000355683 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
STRN3-201ENST00000355683 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms