RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 SESN3P58005 492 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 CCDC40Q4G0X9 1142 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 RCSD1Q6JBY9 416 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 RNF168Q8IYW5 571 aaPredicted RBP10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 SMCR8Q8TEV9 937 aaPredicted RBP10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 RBM41Q96IZ5 413 aaKnown RBP10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 DHRS1Q96LJ7 313 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 EHD4Q9H223 541 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 CBX8Q9HC52 389 aa10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 TPX2Q9ULW0 747 aaKnown RBP10.15□□□□□ -0.78
RBFOX1-203ENST00000355637 RPGRIP1LQ68CZ1 1315 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 EFCAB6Q5THR3 1501 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 ZSCAN12O43309 604 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 SLC4A2P04920 1241 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 VCAM1P19320 739 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 TMCO5AQ8N6Q1 288 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 OR8K1Q8NGG5 319 aa10.15□□□□□ -0.79
RBFOX1-203ENST00000355637 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 ZNF518AQ6AHZ1 1483 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 MYO1EQ12965 1108 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 WLSQ5T9L3 541 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 MIPOL1Q8TD10 442 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 DTNBO60941 627 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 CLCN2P51788 898 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 TYRO3Q06418 890 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 CWF19L1Q69YN2 538 aaKnown RBP10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 NANOGNBQ7Z5D8 188 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 SLC39A2Q9NP94 309 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 PCDHGC5Q9Y5F6 944 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 CD109Q6YHK3 1445 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 INO80Q9ULG1 1556 aaPredicted RBP10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
RBFOX1-203ENST00000355637 BUB1BO60566 1050 aaPredicted RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 RNF40O75150 1001 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 ATP2C2O75185 946 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 KRT38O76015 456 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 ZNF165P49910 485 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 IFT88Q13099 833 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 IDI1Q13907 227 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 IQCF2Q8IXL9 164 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 PRAM1Q96QH2 718 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 OSBPL9Q96SU4 736 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 KIF1BO60333 1816 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 ARHGAP31Q2M1Z3 1444 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 NEMFO60524 1076 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 PPFIA3O75145 1194 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 SLC8A3P57103 927 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 UBE2HP62256 183 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 CHD1LQ86WJ1 897 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 BICD2Q8TD16 824 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 PPP1R13BQ96KQ4 1090 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 NOB1Q9ULX3 412 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 LSM1O15116 133 aaKnown RBP10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 ERLIN1O75477 346 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 RNF8O76064 485 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 TRIM27P14373 513 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 CUL3Q13618 768 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 ACCSLQ4AC99 568 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 NSMCE1Q8WV22 266 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 CUL5Q93034 780 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 SPAG5Q96R06 1193 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 MYO1AQ9UBC5 1043 aa10.13□□□□□ -0.79
RBFOX1-203ENST00000355637 NDUFAB1O14561 156 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 FUT4P22083 530 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 MAP3K11Q16584 847 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 HDGFL2Q7Z4V5 671 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 FAM71BQ8TC56 605 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 NEK9Q8TD19 979 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 ALS2CR12Q96Q35 445 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 SLX1AQ9BQ83 275 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 FAM167BQ9BTA0 163 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 DNAJC25Q9H1X3 360 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 HELLSQ9NRZ9 838 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 VWDEQ8N2E2 1590 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 MYCLP1P12525 358 aaPredicted RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 CCDC80Q76M96 950 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 LARP6Q9BRS8 491 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 BRD8Q9H0E9 1235 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 DDX19BQ9UMR2 479 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 AHCYL1O43865 530 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 OPA1O60313 960 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 E2F6O75461 281 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 ETF1P62495 437 aaKnown RBP10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
RBFOX1-203ENST00000355637 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms