RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 TMOD3Q9NYL9 352 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 CCDC171Q6TFL3 1326 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 SH3TC1Q8TE82 1336 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 NUP98P52948 1817 aa9.55□□□□□ -0.88
COMMD9-202ENST00000355500 HMGB1P1B2RPK0 211 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 SF3A1Q15459 793 aaKnown RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 TNNI3KQ59H18 835 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 MFSD4BQ5TF39 518 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 MAP4K1Q92918 833 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 EAF2Q96CJ1 260 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 SNX14Q9Y5W7 946 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 FPGT-TNNI3KV9GXZ4 949 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 BAG4O95429 457 aaKnown RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 PCCAP05165 728 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 MYL6BP14649 208 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 NEK4P51957 841 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 HAUS7Q99871 368 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 ARPC5LQ9BPX5 153 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 MAP3K20Q9NYL2 800 aaKnown RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 CCNL1Q9UK58 526 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 MYH7P12883 1935 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 ERVV-1B6SEH8 477 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 STARD3NLO95772 234 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 PSMA5P28066 241 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 COPB2P35606 906 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
COMMD9-202ENST00000355500 KRT32Q14532 448 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 C4orf46Q504U0 113 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 RNF20Q5VTR2 975 aa9.54□□□□□ -0.88
COMMD9-202ENST00000355500 A0A087WZG4 1122 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 TGFB2P61812 414 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 TCIRG1Q13488 830 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 ANKRD1Q15327 319 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
COMMD9-202ENST00000355500 SYNPO2Q9UMS6 1093 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 SCN7AQ01118 1682 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
COMMD9-202ENST00000355500 MRE11P49959 708 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 LRRFIP1Q32MZ4 808 aaKnown RBP9.53□□□□□ -0.88
COMMD9-202ENST00000355500 EPHA10Q5JZY3 1008 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 TSHZ3Q63HK5 1081 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 ZNF512BQ96KM6 892 aaPredicted RBP9.53□□□□□ -0.88
COMMD9-202ENST00000355500 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
COMMD9-202ENST00000355500 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.53□□□□□ -0.88
COMMD9-202ENST00000355500 RTL9Q8NET4 1388 aa9.52□□□□□ -0.88
COMMD9-202ENST00000355500 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 LAMA4Q16363 1823 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 COQ9O75208 318 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 ZBTB7AO95365 584 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 LIMCH1Q9UPQ0 1083 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 PA2G4Q9UQ80 394 aaKnown RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 DOCK2Q92608 1830 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 WDR33Q9C0J8 1336 aaKnown RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 MBD3O95983 291 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 CSF1RP07333 972 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 C1QTNF8P60827 252 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 KIF6Q6ZMV9 814 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 UBE3BQ7Z3V4 1068 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 PAIP2Q9BPZ3 127 aaKnown RBP9.52□□□□□ -0.89
COMMD9-202ENST00000355500 ANAPC4Q9UJX5 808 aa9.52□□□□□ -0.89
COMMD9-202ENST00000355500 LRRC27Q9C0I9 530 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 EYA2O00167 538 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 PES1O00541 588 aaKnown RBP9.51□□□□□ -0.89
COMMD9-202ENST00000355500 ZNF445P59923 1031 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 ICE2Q659A1 982 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 ATG9AQ7Z3C6 839 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 MICALL1Q8N3F8 863 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 ZBTB38Q8NAP3 1195 aaPredicted RBP9.51□□□□□ -0.89
COMMD9-202ENST00000355500 RRAGDQ9NQL2 400 aaPredicted RBP9.51□□□□□ -0.89
COMMD9-202ENST00000355500 TFCP2L1Q9NZI6 479 aa9.51□□□□□ -0.89
COMMD9-202ENST00000355500 NAT2P11245 290 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 TERF1P54274 439 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 RUFY3Q7L099 469 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 TTC30AQ86WT1 665 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 COL23A1Q86Y22 540 aaPredicted RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 FBXL16Q8N461 479 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 IL25Q9H293 177 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 DBNLQ9UJU6 430 aaKnown RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
COMMD9-202ENST00000355500 U3KPZ7 1027 aaPredicted RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
COMMD9-202ENST00000355500 A0A1B0GUL6 1792 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms