RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 HAND2P61296 217 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 IL1RL1Q01638 556 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 WDR48Q8TAF3 677 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 METTL13Q8N6R0 699 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CTAGE1Q96RT6 745 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 HINFPQ9BQA5 517 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 MRPL46Q9H2W6 279 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 GSDMDP57764 484 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 BSPRYQ5W0U4 402 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 USH1CQ9Y6N9 552 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CAPN9O14815 690 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 TSR2Q969E8 191 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 HOOK2Q96ED9 719 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 TXNDC9O14530 226 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 RAPGEF1Q13905 1077 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC62Q6P9F0 684 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 ARHGEF1Q92888 912 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 UBN1Q9NPG3 1134 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 MYCP01106 439 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CYP7A1P22680 504 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 UBLCP1Q8WVY7 318 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 EYA3Q99504 573 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 RTEL1-TNFRSF6BF6WH68 1400 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 PSMA7O14818 248 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 BLVRAP53004 296 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 STX1AQ16623 288 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
NUDCD3-202ENST00000355451 CASP2P42575 452 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ARHGAP5Q13017 1502 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 SDCCAG3Q96C92 435 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 SYNDIG1Q9H7V2 258 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 LIMCH1Q9UPQ0 1083 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 I3L4J1 428 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 PHEXP78562 749 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 TEKT2Q9UIF3 430 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 SPOPO43791 374 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 ZNF131P52739 623 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 C16orf45Q96MC5 204 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 SLC8A2Q9UPR5 921 aa12.86□□□□□ -0.35
NUDCD3-202ENST00000355451 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 EXOC6BQ9Y2D4 811 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 HEXIM1O94992 359 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 P4HA1P13674 534 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 PLCG2P16885 1265 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 HP1BP3Q5SSJ5 553 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 GNG11P61952 73 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 JADE1Q6IE81 842 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 ESR2Q92731 530 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 CHMP2AO43633 222 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 COG7P83436 770 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms