RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 AOX1Q06278 1338 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 USP17L21D6R901 530 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 HAUS7Q99871 368 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 SERPINB2P05120 415 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 HSPD1P10809 573 aaKnown RBP14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 TGFBRAP1Q8WUH2 860 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 PPLO60437 1756 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 CCDC183Q5T5S1 534 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 KIAA0825Q8IV33 1275 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 DACT1Q9NYF0 836 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 H7C1W4 665 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 ZNF771Q7L3S4 317 aaPredicted RBP14.28□□□□□ -0.12
PCDHB11-201ENST00000354757 E7EWF7 191 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 FGAP02671 866 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 BAG6P46379 1132 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 LARGE2Q8N3Y3 721 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 STAP2Q9UGK3 403 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 GNAT2P19087 354 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 ZYXQ15942 572 aaKnown RBP14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 CNNM3Q8NE01 707 aa14.27□□□□□ -0.12
PCDHB11-201ENST00000354757 EPS15P42566 896 aa14.27□□□□□ -0.13
PCDHB11-201ENST00000354757 POLA2Q14181 598 aa14.27□□□□□ -0.13
PCDHB11-201ENST00000354757 ME3Q16798 604 aa14.27□□□□□ -0.13
PCDHB11-201ENST00000354757 FAM177A1Q8N128 213 aaPredicted RBP14.27□□□□□ -0.13
PCDHB11-201ENST00000354757 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
PCDHB11-201ENST00000354757 CHGBP05060 677 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 CCDC39Q9UFE4 941 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 SOS2Q07890 1332 aaPredicted RBP14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 MYO1BO43795 1136 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 UIMC1Q96RL1 719 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 EYA3Q99504 573 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 UBE2HP62256 183 aa14.26□□□□□ -0.13
PCDHB11-201ENST00000354757 IDEP14735 1019 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 OFD1O75665 1012 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 NAP1L1P55209 391 aaKnown RBP14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 PRKG1Q13976 671 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 MTERF4Q7Z6M4 381 aaKnown RBP14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 ZSCAN23Q3MJ62 389 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 TTF2Q9UNY4 1162 aaKnown RBP14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 CEP131Q9UPN4 1083 aa14.25□□□□□ -0.13
PCDHB11-201ENST00000354757 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 PRKAB2O43741 272 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 CYP21A2P08686 494 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 OSBPL3Q9H4L5 887 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 BCS1LQ9Y276 419 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 ZNF804BA4D1E1 1349 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 AFMP43652 599 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 TBC1D9BQ66K14 1250 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 OSBP2Q969R2 916 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 MMP10P09238 476 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 HDAC9Q9UKV0 1011 aa14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
PCDHB11-201ENST00000354757 PDIA4P13667 645 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 CBX1P83916 185 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 GRM1Q13255 1194 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 LSG1Q9H089 658 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 KIAA1210Q9ULL0 1709 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 IBSPP21815 317 aaPredicted RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 NAPAP54920 295 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 TMEM132AQ24JP5 1023 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 UBA5Q9GZZ9 404 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 GPCPD1Q9NPB8 672 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 ZNF165P49910 485 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 CDC37L1Q7L3B6 337 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 PLIN2Q99541 437 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 ZSCAN16Q9H4T2 348 aaPredicted RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 ERVV-1B6SEH8 477 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 UBA7P41226 1012 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 DBNDD1Q9H9R9 158 aa14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
PCDHB11-201ENST00000354757 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 MAST3O60307 1309 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 NCAPD2Q15021 1401 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 DIXDC1Q155Q3 683 aa14.22□□□□□ -0.13
PCDHB11-201ENST00000354757 FILIP1LQ4L180 1135 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms