RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 NBPF7P0C2Y1 421 aaPredicted RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 UBE2HP62256 183 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 NUP98P52948 1817 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 CCDC171Q6TFL3 1326 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 SYT1P21579 422 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 TRDNQ13061 729 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 ZRSR2Q15696 482 aaKnown RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 PACS2Q86VP3 889 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
SND1-201ENST00000354725 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.4
SND1-201ENST00000354725 NECTIN1Q15223 517 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 KDM4CQ9H3R0 1056 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 F13A1P00488 732 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 MAP2K2P36507 400 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
SND1-201ENST00000354725 LARGE1O95461 756 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 BAG6P46379 1132 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 PDIA6Q15084 440 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
SND1-201ENST00000354725 SRLQ86TD4 932 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
SND1-201ENST00000354725 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
SND1-201ENST00000354725 STX6O43752 255 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
SND1-201ENST00000354725 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 KCNQ4P56696 695 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 TEFQ10587 303 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 SUGP1Q8IWZ8 645 aaKnown RBP12.56□□□□□ -0.4
SND1-201ENST00000354725 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 ANKRD20A12PQ8NF67 263 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 SYTL4Q96C24 671 aaPredicted RBP12.56□□□□□ -0.4
SND1-201ENST00000354725 NAA30Q147X3 362 aaPredicted RBP12.56□□□□□ -0.4
SND1-201ENST00000354725 CNPY2Q9Y2B0 182 aa12.56□□□□□ -0.4
SND1-201ENST00000354725 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 MCTP2Q6DN12 878 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 ELP1O95163 1332 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
SND1-201ENST00000354725 CXorf38Q8TB03 319 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
SND1-201ENST00000354725 RRP15Q9Y3B9 282 aaKnown RBP12.55□□□□□ -0.4
SND1-201ENST00000354725 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.55□□□□□ -0.4
SND1-201ENST00000354725 COL15A1P39059 1388 aa12.55□□□□□ -0.4
SND1-201ENST00000354725 H0YHG0 523 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 SARNPP82979 210 aaKnown RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 NOM1Q5C9Z4 860 aaKnown RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■■■■■ 129.1
SND1-201ENST00000354725 AP5Z1O43299 807 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 LIG1P18858 919 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 INHBEP58166 350 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 FAM210AQ96ND0 272 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 RGL2O15211 777 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 PTH1RQ03431 593 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 PNPLA7Q6ZV29 1317 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
SND1-201ENST00000354725 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
SND1-201ENST00000354725 MTA1Q13330 715 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 CHPF2Q9P2E5 772 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 ADCK5Q3MIX3 580 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 ARL10Q8N8L6 244 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 LAMB2P55268 1798 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 ZSCAN26Q16670 478 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 NBPF15Q8N660 670 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
SND1-201ENST00000354725 RFX7Q2KHR2 1363 aa12.52□□□□□ -0.4
SND1-201ENST00000354725 CARNS1A5YM72 827 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms