RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 U3KPZ7 1027 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 CYP21A2P08686 494 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 PNOCQ13519 176 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 BEND3Q5T5X7 828 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 SRGAP1Q7Z6B7 1085 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 VSTM4Q8IW00 320 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 CEP112Q8N8E3 955 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 H0YHG0 523 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 CCDC175P0C221 793 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 PFKFB1P16118 471 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 CASP8Q14790 479 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 NCAPHQ15003 741 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 DDX46Q7L014 1031 aaKnown RBP8.75□□□□□ -1.01
BRCA1-201ENST00000352993 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 AKAP2Q9Y2D5 859 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
BRCA1-201ENST00000352993 POTEB2H3BUK9 544 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 PFKFB2O60825 505 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 MTF1Q14872 753 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 ATL3Q6DD88 541 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 LRRC31Q6UY01 552 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 EP400NLQ6ZTU2 488 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 ANKRD20A12PQ8NF67 263 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 PNKPQ96T60 521 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 LLPHQ9BRT6 129 aaKnown RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 GBP3Q9H0R5 595 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 GJB4Q9NTQ9 266 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 CTAGE15A4D2H0 777 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 MYCNP04198 464 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 CTAGE8P0CG41 777 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 CORO7P57737 925 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 SETQ01105 290 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 BEND6Q5SZJ8 279 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 DHX32Q7L7V1 743 aaKnown RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 CTAGE6Q86UF2 777 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 CTAGE4Q8IX94 777 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 USHBP1Q8N6Y0 703 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 LINC00301Q8NCQ3 95 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 IL17REQ8NFR9 667 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 AFAP1L1Q8TED9 768 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 ERLIN2O94905 339 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 TFRCP02786 760 aaKnown RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 MAP2K2P36507 400 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 MCTP2Q6DN12 878 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 MMS22LQ6ZRQ5 1243 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 FCHSD1Q86WN1 690 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 IQUBQ8NA54 791 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 BPIFA3Q9BQP9 254 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 RTEL1Q9NZ71 1219 aa8.74□□□□□ -1.01
BRCA1-201ENST00000352993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-201ENST00000352993 USP42Q9H9J4 1324 aaKnown RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 CUTAO60888 179 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 SASH1O94885 1247 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 TADA2BQ86TJ2 420 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 EFCAB13Q8IY85 973 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 SMARCC2Q8TAQ2 1214 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 FAM71BQ8TC56 605 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 DCCP43146 1447 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 A0A1W2PQ27 194 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 A0A1W2PQ64 194 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 A0A1W2PQD8 194 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 MAP2K7O14733 419 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 IKBKBO14920 756 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 CTDNEP1O95476 244 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 NBPF6Q5VWK0 638 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 NBPF4Q96M43 638 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 RAI14Q9P0K7 980 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 CRYBG1Q9Y4K1 1723 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 TUBGCP6Q96RT7 1819 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 CTAGE9A4FU28 777 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 SOWAHDA6NJG2 315 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 STX10O60499 249 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 RNF40O75150 1001 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 VSNL1P62760 191 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 ALDH8A1Q9H2A2 487 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 MRPL44Q9H9J2 332 aaKnown RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 HOOK1Q9UJC3 728 aaKnown RBP8.73□□□□□ -1.01
BRCA1-201ENST00000352993 CDC23Q9UJX2 597 aa8.73□□□□□ -1.01
BRCA1-201ENST00000352993 ABCA3Q99758 1704 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 ACEP12821 1306 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 PPFIA4O75335 1185 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 CCT5P48643 541 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 SPECC1LQ69YQ0 1117 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 CXorf56Q9H5V9 222 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-201ENST00000352993 EBAG9O00559 213 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 HMGB1P09429 215 aaKnown RBP8.72□□□□□ -1.01
BRCA1-201ENST00000352993 MCMDC2Q4G0Z9 681 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 ANO1Q5XXA6 986 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 KLHL10Q6JEL2 608 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 NEUROD6Q96NK8 337 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
BRCA1-201ENST00000352993 ANKZF1Q9H8Y5 726 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms