RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
SMC6-201ENST00000351948 SYT1P21579 422 aa15.74■□□□□ 0.11
SMC6-201ENST00000351948 PTH1RQ03431 593 aa15.74■□□□□ 0.11
SMC6-201ENST00000351948 SERPINB2P05120 415 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 ZNF165P49910 485 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 SKIDA1Q1XH10 827 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 NLRP10Q86W26 655 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 PDE6BP35913 854 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 PHKBQ93100 1093 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 NF2P35240 595 aa15.73■□□□□ 0.11
SMC6-201ENST00000351948 PRKCSHP14314 528 aaPredicted RBP15.72■□□□□ 0.11
SMC6-201ENST00000351948 V9GY48 417 aaPredicted RBP15.72■□□□□ 0.11
SMC6-201ENST00000351948 TRIM75PA6NK02 468 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 USP17L21D6R901 530 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 PARP1P09874 1014 aaKnown RBP15.72■□□□□ 0.11
SMC6-201ENST00000351948 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 NLGN1Q8N2Q7 840 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 DHX58Q96C10 678 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
SMC6-201ENST00000351948 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 PDE8BO95263 885 aa15.72■□□□□ 0.11
SMC6-201ENST00000351948 CDC42BPGQ6DT37 1551 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 C6orf50Q9HD87 102 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 SNAP23O00161 211 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
SMC6-201ENST00000351948 PDE6AP16499 860 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 PPP4R3AQ6IN85 833 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 TSG101Q99816 390 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 ZBTB21Q9ULJ3 1066 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 ANGEL1Q9UNK9 670 aaKnown RBP15.71■□□□□ 0.11
SMC6-201ENST00000351948 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
SMC6-201ENST00000351948 SPDYE3A6NKU9 549 aa15.71■□□□□ 0.11
SMC6-201ENST00000351948 SPTLC2O15270 562 aa15.71■□□□□ 0.1
SMC6-201ENST00000351948 TNS3Q68CZ2 1445 aa15.71■□□□□ 0.1
SMC6-201ENST00000351948 FCHSD1Q86WN1 690 aa15.71■□□□□ 0.1
SMC6-201ENST00000351948 MMRN2Q9H8L6 949 aa15.71■□□□□ 0.1
SMC6-201ENST00000351948 PALD1Q9ULE6 856 aa15.71■□□□□ 0.1
SMC6-201ENST00000351948 CAMSAP1Q5T5Y3 1602 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 AOX1Q06278 1338 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 CTAGE5O15320 804 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMC6-201ENST00000351948 STAT6P42226 847 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 CMTR1Q8N1G2 835 aaKnown RBP15.7■□□□□ 0.1
SMC6-201ENST00000351948 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 GPR101Q96P66 508 aaPredicted RBP15.7■□□□□ 0.1
SMC6-201ENST00000351948 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 MTIF2P46199 727 aaKnown RBP15.7■□□□□ 0.1
SMC6-201ENST00000351948 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 SUSD4Q5VX71 490 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 COPRSQ9NQ92 184 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 USP40Q9NVE5 1235 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 EPB41L2O43491 1005 aaKnown RBP15.7■□□□□ 0.1
SMC6-201ENST00000351948 KCNG4Q8TDN1 519 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 MRPS27Q92552 414 aaKnown RBP15.7■□□□□ 0.1
SMC6-201ENST00000351948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■■■■ 85.7
SMC6-201ENST00000351948 CLIP2Q9UDT6 1046 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 KLHL40Q2TBA0 621 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 CACNA2D4Q7Z3S7 1137 aa15.7■□□□□ 0.1
SMC6-201ENST00000351948 DNA2P51530 1060 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 TFAP4Q01664 338 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 JAK2O60674 1132 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 TOP1P11387 765 aaKnown RBP15.69■□□□□ 0.1
SMC6-201ENST00000351948 KRT2P35908 639 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 ZNF174Q15697 407 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 TMX1Q9H3N1 280 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 E7EWF7 191 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 GPS2Q13227 327 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 LETM2Q2VYF4 491 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 SIRT2Q8IXJ6 389 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 SYCP3Q8IZU3 236 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 FBXO3Q9UK99 471 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 C1orf167Q5SNV9 1468 aa15.69■□□□□ 0.1
SMC6-201ENST00000351948 SSR1P43307 286 aaKnown RBP15.68■□□□□ 0.1
SMC6-201ENST00000351948 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
SMC6-201ENST00000351948 STX1AQ16623 288 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 FKBP15Q5T1M5 1219 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 KIAA1328Q86T90 577 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 AMPD3Q01432 767 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 CPXCR1Q8N123 301 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
SMC6-201ENST00000351948 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 GPR162Q16538 588 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 DBNDD1Q9H9R9 158 aa15.68■□□□□ 0.1
SMC6-201ENST00000351948 ARHGAP29Q52LW3 1261 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 RRAGBQ5VZM2 374 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 RUFY1Q96T51 708 aa15.67■□□□□ 0.1
SMC6-201ENST00000351948 EAPPQ56P03 285 aaPredicted RBP15.67■□□□□ 0.1
SMC6-201ENST00000351948 NUP88Q99567 741 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms