RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 CLIC4Q9Y696 253 aa19.41■□□□□ 0.7
PDAP1-201ENST00000350498 RBM43Q6ZSC3 357 aaKnown RBP19.4■□□□□ 0.7
PDAP1-201ENST00000350498 CFAP45Q9UL16 551 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 SPDYE4A6NLX3 237 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 GOLGA6L6A8MZA4 724 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 PDE8AO60658 829 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 PPP4R3BQ5MIZ7 849 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 PLA2G4DQ86XP0 818 aa19.4■□□□□ 0.7
PDAP1-201ENST00000350498 CACTINQ8WUQ7 758 aaKnown RBP19.4■□□□□ 0.7
PDAP1-201ENST00000350498 CCDC94Q9BW85 323 aaPredicted RBP19.4■□□□□ 0.7
PDAP1-201ENST00000350498 LRP6O75581 1613 aa19.39■□□□□ 0.7
PDAP1-201ENST00000350498 NHSL1Q5SYE7 1610 aa19.39■□□□□ 0.7
PDAP1-201ENST00000350498 B4E1Z4 1266 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 ZFYP08048 801 aaPredicted RBP19.39■□□□□ 0.69
PDAP1-201ENST00000350498 ME1P48163 572 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 ZSCAN25Q6NSZ9 544 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 INTS5Q6P9B9 1019 aaKnown RBP19.39■□□□□ 0.69
PDAP1-201ENST00000350498 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 PDIA4P13667 645 aaKnown RBP19.39■□□□□ 0.69
PDAP1-201ENST00000350498 PDE6AP16499 860 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 NCOA7Q8NI08 942 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 CTNNA3Q9UI47 895 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 FBXO3Q9UK99 471 aa19.39■□□□□ 0.69
PDAP1-201ENST00000350498 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 PRKAB2O43741 272 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 CTDSPL2Q05D32 466 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 RALYLQ86SE5 291 aaKnown RBP19.38■□□□□ 0.69
PDAP1-201ENST00000350498 ORC3Q9UBD5 711 aaPredicted RBP19.38■□□□□ 0.69
PDAP1-201ENST00000350498 PCDHA7Q9UN72 937 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 ITPK1Q13572 414 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 RASGRF1Q13972 1273 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 PHKBQ93100 1093 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 CLIP2Q9UDT6 1046 aa19.38■□□□□ 0.69
PDAP1-201ENST00000350498 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 NEDD4P46934 1319 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 COL4A1P02462 1669 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 MYH7P12883 1935 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 ATP6V1AP38606 617 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 BCAMP50895 628 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 MTERF4Q7Z6M4 381 aaKnown RBP19.37■□□□□ 0.69
PDAP1-201ENST00000350498 TDRD7Q8NHU6 1098 aaKnown RBP19.37■□□□□ 0.69
PDAP1-201ENST00000350498 MYH15Q9Y2K3 1946 aa19.37■□□□□ 0.69
PDAP1-201ENST00000350498 TCRBV5S4A2TA0A5A2 114 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 CDC27P30260 824 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
PDAP1-201ENST00000350498 EVCP57679 992 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 FSIP1Q8NA03 581 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 MYH3P11055 1940 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 KCNQ2O43526 872 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 EPB41L4AQ9HCS5 686 aaPredicted RBP19.36■□□□□ 0.69
PDAP1-201ENST00000350498 PRDM4Q9UKN5 801 aa19.36■□□□□ 0.69
PDAP1-201ENST00000350498 USP27XA6NNY8 438 aa19.35■□□□□ 0.69
PDAP1-201ENST00000350498 IL6STP40189 918 aaPredicted RBP19.35■□□□□ 0.69
PDAP1-201ENST00000350498 ENGASEQ8NFI3 743 aa19.35■□□□□ 0.69
PDAP1-201ENST00000350498 FGFR2P21802 821 aa19.35■□□□□ 0.69
PDAP1-201ENST00000350498 U2AF2P26368 475 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDAP1-201ENST00000350498 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
PDAP1-201ENST00000350498 IQCB1Q15051 598 aa19.35■□□□□ 0.69
PDAP1-201ENST00000350498 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.691e-10■□□□□ 8.9
PDAP1-201ENST00000350498 MICU3Q86XE3 530 aa19.34■□□□□ 0.69
PDAP1-201ENST00000350498 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 ZKSCAN3Q9BRR0 538 aa19.34■□□□□ 0.69
PDAP1-201ENST00000350498 NUTM2BA6NNL0 878 aaPredicted RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 NUTM2EB1AL46 878 aaPredicted RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 CPLX1O14810 134 aa19.34■□□□□ 0.69
PDAP1-201ENST00000350498 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 NUTM2AQ8IVF1 878 aaPredicted RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 SPATA5Q8NB90 893 aa19.34■□□□□ 0.69
PDAP1-201ENST00000350498 STRBPQ96SI9 672 aaKnown RBP19.34■□□□□ 0.69
PDAP1-201ENST00000350498 NDUFA8P51970 172 aa19.33■□□□□ 0.69
PDAP1-201ENST00000350498 LRRFIP1Q32MZ4 808 aaKnown RBP19.33■□□□□ 0.69
PDAP1-201ENST00000350498 MIGA1Q8NAN2 632 aa19.33■□□□□ 0.69
PDAP1-201ENST00000350498 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.69
PDAP1-201ENST00000350498 MBD4O95243 580 aa19.33■□□□□ 0.68
PDAP1-201ENST00000350498 TPM3P06753 285 aa19.33■□□□□ 0.68
PDAP1-201ENST00000350498 ARID4AP29374 1257 aaPredicted RBP19.33■□□□□ 0.68
PDAP1-201ENST00000350498 PUM3Q15397 648 aaKnown RBP19.33■□□□□ 0.68
PDAP1-201ENST00000350498 ZNF592Q92610 1267 aa19.33■□□□□ 0.68
PDAP1-201ENST00000350498 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
PDAP1-201ENST00000350498 TNNT1P13805 278 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 C3orf67Q6ZVT6 689 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
PDAP1-201ENST00000350498 LPIN2Q92539 896 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 AIDAQ96BJ3 306 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 DOT1LQ8TEK3 1739 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 ERVV-1B6SEH8 477 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 MARCKSP29966 332 aaPredicted RBP19.32■□□□□ 0.68
PDAP1-201ENST00000350498 FILIP1Q7Z7B0 1213 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 FBXL16Q8N461 479 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 PDCL2Q8N4E4 241 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 LINC00301Q8NCQ3 95 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 ZNF396Q96N95 335 aaPredicted RBP19.32■□□□□ 0.68
PDAP1-201ENST00000350498 MPHOSPH8Q99549 860 aa19.32■□□□□ 0.68
PDAP1-201ENST00000350498 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
PDAP1-201ENST00000350498 COL16A1Q07092 1604 aaPredicted RBP19.31■□□□□ 0.68
PDAP1-201ENST00000350498 ISM2Q6H9L7 571 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms