RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PFDN4Q9NQP4 134 aa6.88□□□□□ -1.31
RFC1-201ENST00000349703 LRFN1Q9P244 771 aa6.88□□□□□ -1.31
RFC1-201ENST00000349703 SERTM1A2A2V5 107 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 CPNE3O75131 537 aaKnown RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 PSAPP07602 524 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 STK3Q13188 491 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 MORC1Q86VD1 984 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 NUP133Q8WUM0 1156 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 EHMT1Q9H9B1 1298 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 ERBINQ96RT1 1412 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 FBXO45P0C2W1 286 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 RELBQ01201 579 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 MIER2Q8N344 545 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 ERCC4Q92889 916 aaPredicted RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 CCDC94Q9BW85 323 aaPredicted RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 UHRF1BP1Q6BDS2 1440 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 PDE6BP35913 854 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 NUCB1Q02818 461 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 SKAP1Q86WV1 359 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 TAGAPQ8N103 731 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
RFC1-201ENST00000349703 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 PPP1R9AQ9ULJ8 1098 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 CAMSAP2Q08AD1 1489 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 SNAPC4Q5SXM2 1469 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 MEIS1O00470 390 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 APOA4P06727 396 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 PSMA4P25789 261 aaKnown RBP6.87□□□□□ -1.31
RFC1-201ENST00000349703 RPS6KA2Q15349 733 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 KLHL40Q2TBA0 621 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 RILPL1Q5EBL4 403 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 MCTP1Q6DN14 999 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 CPLX4Q7Z7G2 160 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 TNS4Q8IZW8 715 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 IFT43Q96FT9 208 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 ZNF180Q9UJW8 692 aa6.87□□□□□ -1.31
RFC1-201ENST00000349703 TLDC2A0PJX2 215 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 SNPHO15079 494 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 SPTLC1O15269 473 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 MYO1BO43795 1136 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 PAFAH1B1P43034 410 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 PLIN5Q00G26 463 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 C1orf131Q8NDD1 294 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 SNX21Q969T3 373 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 KIF12Q96FN5 646 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 ZSCAN31Q96LW9 406 aaPredicted RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 UNC13AQ9UPW8 1703 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 GOLGA6L4A6NEF3 574 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 USP17L7P0C7H9 530 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 LIG1P18858 919 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 RABEP1Q15276 862 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 PTPN21Q16825 1174 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 RETREG3Q86VR2 466 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 ABCA10Q8WWZ4 1543 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 FANCD2Q9BXW9 1451 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 ATAD2Q6PL18 1390 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 CCDC189A1A4V9 331 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 ICMTO60725 284 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 ESRRAP11474 423 aaPredicted RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 PRPHP41219 470 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 NOP2P46087 812 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 DHX9Q08211 1270 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 IFIT1BQ5T764 474 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 SMCR8Q8TEV9 937 aaPredicted RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 TNPO1Q92973 898 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 ERLEC1Q96DZ1 483 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 USP26Q9BXU7 913 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 DDX41Q9UJV9 622 aaKnown RBP6.86□□□□□ -1.31
RFC1-201ENST00000349703 HPS5Q9UPZ3 1129 aa6.86□□□□□ -1.31
RFC1-201ENST00000349703 KIF20AO95235 890 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 SLC3A2P08195 630 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 FOXR1Q6PIV2 292 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 SYNCQ9H7C4 482 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 RLBP1P12271 317 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 FOXC1Q12948 553 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 CCAR2Q8N163 923 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 SGSM3Q96HU1 749 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 TSPYL1Q9H0U9 437 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 TSPY26PQ9H489 355 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 INVSQ9Y283 1065 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 POLA1P09884 1462 aaPredicted RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 HSF2BPO75031 334 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 BCAR3O75815 825 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 GRAMD1BQ3KR37 738 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 UTP14CQ5TAP6 766 aaKnown RBP6.85□□□□□ -1.31
RFC1-201ENST00000349703 TEX19Q8NA77 164 aa6.85□□□□□ -1.31
RFC1-201ENST00000349703 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms