RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 APOBEC3FQ8IUX4 373 aaKnown RBP27.2■■□□□ 1.94
SNX3-202ENST00000349379 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.94
SNX3-202ENST00000349379 CDCA5Q96FF9 252 aa27.2■■□□□ 1.94
SNX3-202ENST00000349379 DBNDD2Q9BQY9 259 aa27.2■■□□□ 1.94
SNX3-202ENST00000349379 RHPN1Q8TCX5 695 aa27.19■■□□□ 1.94
SNX3-202ENST00000349379 DBNLQ9UJU6 430 aaKnown RBP27.19■■□□□ 1.94
SNX3-202ENST00000349379 SCAF8Q9UPN6 1271 aaKnown RBP27.19■■□□□ 1.94
SNX3-202ENST00000349379 TLL2Q9Y6L7 1015 aa27.19■■□□□ 1.94
SNX3-202ENST00000349379 PAPPA2Q9BXP8 1791 aa27.19■■□□□ 1.94
SNX3-202ENST00000349379 PRDX5P30044 214 aa27.18■■□□□ 1.94
SNX3-202ENST00000349379 GORABQ5T7V8 394 aa27.18■■□□□ 1.94
SNX3-202ENST00000349379 HMG20BQ9P0W2 317 aa27.18■■□□□ 1.94
SNX3-202ENST00000349379 THSD7BQ9C0I4 1608 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 MYO1BO43795 1136 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 UQCRFS1P1P0C7P4 283 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 RBM5P52756 815 aaKnown RBP eCLIP27.17■■□□□ 1.94
SNX3-202ENST00000349379 SPDYE2Q495Y8 402 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 HHIPL2Q6UWX4 724 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 ZGPATQ8N5A5 531 aaKnown RBP27.17■■□□□ 1.94
SNX3-202ENST00000349379 TEKT1Q969V4 418 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 KIF1BPQ96EK5 621 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 ZNF512BQ96KM6 892 aaPredicted RBP27.17■■□□□ 1.94
SNX3-202ENST00000349379 ZDHHC15Q96MV8 337 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 ZNF408Q9H9D4 720 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 MAST2Q6P0Q8 1798 aa27.17■■□□□ 1.94
SNX3-202ENST00000349379 RAB11FIP3O75154 756 aa27.16■■□□□ 1.94
SNX3-202ENST00000349379 MCAMP43121 646 aa27.16■■□□□ 1.94
SNX3-202ENST00000349379 SAPCD2Q86UD0 394 aa27.16■■□□□ 1.94
SNX3-202ENST00000349379 JMYQ8N9B5 988 aa27.16■■□□□ 1.94
SNX3-202ENST00000349379 CRBNQ96SW2 442 aa27.16■■□□□ 1.94
SNX3-202ENST00000349379 TLR7Q9NYK1 1049 aaKnown RBP27.16■■□□□ 1.94
SNX3-202ENST00000349379 MKRN1Q9UHC7 482 aaKnown RBP27.16■■□□□ 1.94
SNX3-202ENST00000349379 ABT1Q9ULW3 272 aaKnown RBP27.16■■□□□ 1.94
SNX3-202ENST00000349379 LDHBP07195 334 aaKnown RBP27.15■■□□□ 1.94
SNX3-202ENST00000349379 SPATA5Q8NB90 893 aa27.15■■□□□ 1.94
SNX3-202ENST00000349379 CCDC8Q9H0W5 538 aaPredicted RBP27.15■■□□□ 1.94
SNX3-202ENST00000349379 DOCK2Q92608 1830 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 CLRN2A0PK11 232 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 DEFB115Q30KQ5 88 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 CCDC158Q5M9N0 1113 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 PI16Q6UXB8 463 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 HHIPL1Q96JK4 782 aa27.14■■□□□ 1.94
SNX3-202ENST00000349379 TDRD3Q9H7E2 651 aaKnown RBP27.14■■□□□ 1.94
SNX3-202ENST00000349379 GBA2Q9HCG7 927 aaPredicted RBP27.14■■□□□ 1.94
SNX3-202ENST00000349379 ZNF70Q9UC06 446 aaPredicted RBP27.14■■□□□ 1.94
SNX3-202ENST00000349379 APOBEC3HQ6NTF7 200 aaKnown RBP27.13■■□□□ 1.93
SNX3-202ENST00000349379 IL1RAPL2Q9NP60 686 aa27.13■■□□□ 1.93
SNX3-202ENST00000349379 PCDHB15Q9Y5E8 787 aa27.13■■□□□ 1.93
SNX3-202ENST00000349379 PPP2R3BQ9Y5P8 575 aa27.13■■□□□ 1.93
SNX3-202ENST00000349379 TTC39AQ5SRH9 613 aa27.12■■□□□ 1.93
SNX3-202ENST00000349379 AACSQ86V21 672 aa27.12■■□□□ 1.93
SNX3-202ENST00000349379 DEFB129Q9H1M3 183 aa27.12■■□□□ 1.93
SNX3-202ENST00000349379 DIXDC1Q155Q3 683 aa27.11■■□□□ 1.93
SNX3-202ENST00000349379 PRAMEF18Q5VWM3 479 aa27.11■■□□□ 1.93
SNX3-202ENST00000349379 VEZTQ9HBM0 779 aa27.11■■□□□ 1.93
SNX3-202ENST00000349379 DAGLAQ9Y4D2 1042 aa27.11■■□□□ 1.93
SNX3-202ENST00000349379 SSC5DA1L4H1 1573 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 VEGFBP49765 207 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 SPTY2D1Q68D10 685 aaPredicted RBP27.1■■□□□ 1.93
SNX3-202ENST00000349379 CLASRPQ8N2M8 674 aaKnown RBP27.1■■□□□ 1.93
SNX3-202ENST00000349379 C2orf69Q8N8R5 385 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 DCTPP1Q9H773 170 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 ABCF2Q9UG63 623 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 GAKO14976 1311 aa27.1■■□□□ 1.93
SNX3-202ENST00000349379 FKBP1BP68106 108 aa27.09■■□□□ 1.93
SNX3-202ENST00000349379 APBB1O00213 710 aa27.08■■□□□ 1.93
SNX3-202ENST00000349379 TNFAIP1Q13829 316 aa27.08■■□□□ 1.93
SNX3-202ENST00000349379 ERICH6Q7L0X2 663 aa27.08■■□□□ 1.93
SNX3-202ENST00000349379 ZNF384Q8TF68 577 aa27.08■■□□□ 1.93
SNX3-202ENST00000349379 HUNKP57058 714 aa27.07■■□□□ 1.92
SNX3-202ENST00000349379 RASA3Q14644 834 aa27.07■■□□□ 1.92
SNX3-202ENST00000349379 FKBP1CQ5VVH2 108 aa27.07■■□□□ 1.92
SNX3-202ENST00000349379 TBC1D9Q6ZT07 1266 aa27.07■■□□□ 1.92
SNX3-202ENST00000349379 FAM163AQ96GL9 167 aaPredicted RBP27.07■■□□□ 1.92
SNX3-202ENST00000349379 DZIP1Q86YF9 867 aaKnown RBP27.06■■□□□ 1.92
SNX3-202ENST00000349379 SNRKQ9NRH2 765 aa27.06■■□□□ 1.92
SNX3-202ENST00000349379 OTOFQ9HC10 1997 aa27.06■■□□□ 1.92
SNX3-202ENST00000349379 CDK5RAP2Q96SN8 1893 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 CYP2E1P05181 493 aaPredicted RBP27.05■■□□□ 1.92
SNX3-202ENST00000349379 NF2P35240 595 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 MECOMQ03112 1051 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 AAMPQ13685 434 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 NSUN4Q96CB9 384 aaKnown RBP27.05■■□□□ 1.92
SNX3-202ENST00000349379 CAPNS2Q96L46 248 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 LRRCC1Q9C099 1032 aa27.05■■□□□ 1.92
SNX3-202ENST00000349379 SUPT16HQ9Y5B9 1047 aaKnown RBP27.05■■□□□ 1.92
SNX3-202ENST00000349379 WDR33Q9C0J8 1336 aaKnown RBP27.05■■□□□ 1.92
SNX3-202ENST00000349379 ECE1P42892 770 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 ZAP70P43403 619 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 CYP4F22Q6NT55 531 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 SLF2Q8IX21 1173 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 TEPSINQ96N21 525 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 AK9Q5TCS8 1911 aa27.04■■□□□ 1.92
SNX3-202ENST00000349379 MROH7-TTC4A0A0A0MT08 1334 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 TCP10L2B9ZVM9 353 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 IGSF3O75054 1194 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 CACNB3P54284 484 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 CDC42EP5Q6NZY7 148 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 FAM83AQ86UY5 434 aa27.03■■□□□ 1.92
SNX3-202ENST00000349379 FOCADQ5VW36 1801 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms