RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 KCNQ3O43525 872 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 CDC27P30260 824 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
RLIM-202ENST00000349225 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
RLIM-202ENST00000349225 LRRIQ3A6PVS8 624 aaPredicted RBP16.41■□□□□ 0.22
RLIM-202ENST00000349225 WDHD1O75717 1129 aaPredicted RBP16.41■□□□□ 0.22
RLIM-202ENST00000349225 CPP00450 1065 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 PFKFB1P16118 471 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 VSNL1P62760 191 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 HDXQ7Z353 690 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 PDE4BQ07343 736 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 SRGAP1Q7Z6B7 1085 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 PPM1EQ8WY54 764 aa16.41■□□□□ 0.22
RLIM-202ENST00000349225 KRT32Q14532 448 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
RLIM-202ENST00000349225 JAKMIP3Q5VZ66 844 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
RLIM-202ENST00000349225 CLIC6Q96NY7 704 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 BMP6P22004 513 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
RLIM-202ENST00000349225 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 CASP8Q14790 479 aa16.4■□□□□ 0.22
RLIM-202ENST00000349225 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 PNOCQ13519 176 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 FOXP4Q8IVH2 680 aaPredicted RBP16.39■□□□□ 0.21
RLIM-202ENST00000349225 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 MYL5Q02045 173 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 FAM204AQ9H8W3 233 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 NWD1Q149M9 1564 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 NCAPD2Q15021 1401 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 ABL1P00519 1130 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
RLIM-202ENST00000349225 GSCP56915 257 aaPredicted RBP16.39■□□□□ 0.21
RLIM-202ENST00000349225 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
RLIM-202ENST00000349225 STK38Q15208 465 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
RLIM-202ENST00000349225 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
RLIM-202ENST00000349225 SPTLC2O15270 562 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 PDIA3P30101 505 aaKnown RBP16.38■□□□□ 0.21
RLIM-202ENST00000349225 GPHNQ9NQX3 736 aaPredicted RBP16.38■□□□□ 0.21
RLIM-202ENST00000349225 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
RLIM-202ENST00000349225 STX10O60499 249 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 RHOXF2BP0C7M4 288 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.38■□□□□ 0.21
RLIM-202ENST00000349225 RHOXF2Q9BQY4 288 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 USP6P35125 1406 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 UBR1Q8IWV7 1749 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 SOWAHDA6NJG2 315 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
RLIM-202ENST00000349225 SKIDA1Q1XH10 827 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 PDILTQ8N807 584 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 LZTFL1Q9NQ48 299 aa16.38■□□□□ 0.21
RLIM-202ENST00000349225 A2ML1A8K2U0 1454 aa16.37■□□□□ 0.21
RLIM-202ENST00000349225 SYF2O95926 243 aaKnown RBP16.37■□□□□ 0.21
RLIM-202ENST00000349225 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
RLIM-202ENST00000349225 SWT1Q5T5J6 900 aaKnown RBP16.37■□□□□ 0.21
RLIM-202ENST00000349225 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.37■□□□□ 0.21
RLIM-202ENST00000349225 POLR3EQ9NVU0 708 aa16.37■□□□□ 0.21
RLIM-202ENST00000349225 DHX32Q7L7V1 743 aaKnown RBP16.37■□□□□ 0.21
RLIM-202ENST00000349225 TADA2BQ86TJ2 420 aa16.37■□□□□ 0.21
RLIM-202ENST00000349225 MAP3K2Q9Y2U5 619 aa16.37■□□□□ 0.21
RLIM-202ENST00000349225 FLT4P35916 1363 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
RLIM-202ENST00000349225 MMS22LQ6ZRQ5 1243 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 CCDC102AQ96A19 550 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 C9orf78Q9NZ63 289 aaPredicted RBP16.36■□□□□ 0.21
RLIM-202ENST00000349225 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
RLIM-202ENST00000349225 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
RLIM-202ENST00000349225 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
RLIM-202ENST00000349225 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 MYSM1Q5VVJ2 828 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 KCNG4Q8TDN1 519 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 DEF6Q9H4E7 631 aa16.36■□□□□ 0.21
RLIM-202ENST00000349225 GOLGA6L9A6NEM1 432 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 PPFIA4O75335 1185 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
RLIM-202ENST00000349225 EFCAB13Q8IY85 973 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 NOA1Q8NC60 698 aaKnown RBP16.35■□□□□ 0.21
RLIM-202ENST00000349225 MED15Q96RN5 788 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 CDC23Q9UJX2 597 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
RLIM-202ENST00000349225 FOXN1O15353 648 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 YEATS4O95619 227 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 MED1Q15648 1581 aaPredicted RBP16.35■□□□□ 0.21
RLIM-202ENST00000349225 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 EXOC5O00471 708 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 CMA1P23946 247 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 TEFQ10587 303 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 SHC4Q6S5L8 630 aa16.35■□□□□ 0.21
RLIM-202ENST00000349225 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms