RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 TM6SF1Q9BZW5 370 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 USP44Q9H0E7 712 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 H0YHG0 523 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 SRGAP1Q7Z6B7 1085 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
MBD1-204ENST00000347968 FAM71BQ8TC56 605 aa18.61■□□□□ 0.57
MBD1-204ENST00000347968 TUBB4AP04350 444 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 GSPT2Q8IYD1 628 aaKnown RBP18.6■□□□□ 0.57
MBD1-204ENST00000347968 IGSF22Q8N9C0 903 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 KCNJ6P48051 423 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 ANKLE2Q86XL3 938 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 NOA1Q8NC60 698 aaKnown RBP18.6■□□□□ 0.57
MBD1-204ENST00000347968 N4BP2L2Q92802 583 aaPredicted RBP18.6■□□□□ 0.57
MBD1-204ENST00000347968 HSD3B7Q9H2F3 369 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 CENPHQ9H3R5 247 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
MBD1-204ENST00000347968 RCOR1Q9UKL0 485 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 ERLIN1O75477 346 aa18.6■□□□□ 0.57
MBD1-204ENST00000347968 A1BGP04217 495 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 CHGBP05060 677 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 SLC3A2P08195 630 aaKnown RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 AKAP17AQ02040 695 aaKnown RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 FMR1NBQ8N0W7 255 aaPredicted RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 KAT14Q9H8E8 782 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 TUBGCP6Q96RT7 1819 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 A0A0D9SFI3 127 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 ACTN3Q08043 901 aaPredicted RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
MBD1-204ENST00000347968 MRPS27Q92552 414 aaKnown RBP18.59■□□□□ 0.57
MBD1-204ENST00000347968 SKAP2O75563 359 aaPredicted RBP18.58■□□□□ 0.57
MBD1-204ENST00000347968 INPP5BP32019 993 aa18.58■□□□□ 0.57
MBD1-204ENST00000347968 MAP9Q49MG5 647 aa18.58■□□□□ 0.57
MBD1-204ENST00000347968 ARHGAP6O43182 974 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 EPB41L2O43491 1005 aaKnown RBP18.58■□□□□ 0.56
MBD1-204ENST00000347968 ABL1P00519 1130 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
MBD1-204ENST00000347968 SOWAHDA6NJG2 315 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 SYF2O95926 243 aaKnown RBP18.58■□□□□ 0.56
MBD1-204ENST00000347968 ZNF569Q5MCW4 686 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 Q6ZUG5 572 aa18.58■□□□□ 0.56
MBD1-204ENST00000347968 EBAG9O00559 213 aa18.57■□□□□ 0.56
MBD1-204ENST00000347968 PSMA5P28066 241 aa18.57■□□□□ 0.56
MBD1-204ENST00000347968 EDC3Q96F86 508 aaKnown RBP18.57■□□□□ 0.56
MBD1-204ENST00000347968 PA2G4Q9UQ80 394 aaKnown RBP18.57■□□□□ 0.56
MBD1-204ENST00000347968 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
MBD1-204ENST00000347968 INTS13Q9NVM9 706 aa18.57■□□□□ 0.56
MBD1-204ENST00000347968 LONRF3Q496Y0 759 aa18.56■□□□□ 0.56
MBD1-204ENST00000347968 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
MBD1-204ENST00000347968 BCAS4Q8TDM0 211 aa18.56■□□□□ 0.56
MBD1-204ENST00000347968 AOX1Q06278 1338 aa18.56■□□□□ 0.56
MBD1-204ENST00000347968 NBPF7P0C2Y1 421 aaPredicted RBP18.56■□□□□ 0.56
MBD1-204ENST00000347968 GNL3LQ9NVN8 582 aaKnown RBP18.56■□□□□ 0.56
MBD1-204ENST00000347968 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 VSTM4Q8IW00 320 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 CDC5LQ99459 802 aaKnown RBP18.55■□□□□ 0.56
MBD1-204ENST00000347968 GJB4Q9NTQ9 266 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 DLG5Q8TDM6 1919 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 ZNF202O95125 648 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 NDUFB9Q9Y6M9 179 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
MBD1-204ENST00000347968 FKBP15Q5T1M5 1219 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
MBD1-204ENST00000347968 SSH3Q8TE77 659 aa18.55■□□□□ 0.56
MBD1-204ENST00000347968 GIGYF1O75420 1035 aaPredicted RBP18.54■□□□□ 0.56
MBD1-204ENST00000347968 ELF1P32519 619 aa18.54■□□□□ 0.56
MBD1-204ENST00000347968 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
MBD1-204ENST00000347968 HNRNPLLQ8WVV9 542 aaKnown RBP18.54■□□□□ 0.56
MBD1-204ENST00000347968 MAP4K1Q92918 833 aa18.54■□□□□ 0.56
MBD1-204ENST00000347968 MIEF2Q96C03 454 aa18.54■□□□□ 0.56
MBD1-204ENST00000347968 NLRP12P59046 1061 aa18.54■□□□□ 0.56
MBD1-204ENST00000347968 CALR3Q96L12 384 aaKnown RBP18.54■□□□□ 0.56
MBD1-204ENST00000347968 USP6P35125 1406 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 RGPD8O14715 1765 aaPredicted RBP18.53■□□□□ 0.56
MBD1-204ENST00000347968 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
MBD1-204ENST00000347968 STK38Q15208 465 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 PHAXQ9H814 394 aaKnown RBP18.53■□□□□ 0.56
MBD1-204ENST00000347968 RAB21Q9UL25 225 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.53■□□□□ 0.56
MBD1-204ENST00000347968 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 MARCKSP29966 332 aaPredicted RBP18.53■□□□□ 0.56
MBD1-204ENST00000347968 GGCXP38435 758 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 SETQ01105 290 aaPredicted RBP18.53■□□□□ 0.56
MBD1-204ENST00000347968 ANKRD1Q15327 319 aa18.53■□□□□ 0.56
MBD1-204ENST00000347968 FAXDC2Q96IV6 333 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms