RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 HSP90B1P14625 803 aaKnown RBP25■■□□□ 1.59
PTPN18-202ENST00000347849 APOBRQ0VD83 1088 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 ARHGEF1Q92888 912 aaKnown RBP25■■□□□ 1.59
PTPN18-202ENST00000347849 GTF3C6Q969F1 213 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 LAMA4Q16363 1823 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 TCRBV5S4A2TA0A5A2 114 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 SEPT12Q8IYM1 358 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 NKX2-3Q8TAU0 364 aa25■■□□□ 1.59
PTPN18-202ENST00000347849 CELF1Q92879 486 aaKnown RBP25■■□□□ 1.59
PTPN18-202ENST00000347849 GTF2E1P29083 439 aaPredicted RBP24.99■■□□□ 1.59
PTPN18-202ENST00000347849 SCRN1Q12765 414 aa24.99■■□□□ 1.59
PTPN18-202ENST00000347849 TTF1Q15361 905 aaPredicted RBP24.99■■□□□ 1.59
PTPN18-202ENST00000347849 LARP1BQ659C4 914 aaKnown RBP24.99■■□□□ 1.59
PTPN18-202ENST00000347849 CDC37L1Q7L3B6 337 aa24.99■■□□□ 1.59
PTPN18-202ENST00000347849 DENND2AQ9ULE3 1009 aa24.99■■□□□ 1.59
PTPN18-202ENST00000347849 FGD1P98174 961 aa24.98■■□□□ 1.59
PTPN18-202ENST00000347849 SF3B3Q15393 1217 aaKnown RBP24.98■■□□□ 1.59
PTPN18-202ENST00000347849 CAMK4Q16566 473 aa24.98■■□□□ 1.59
PTPN18-202ENST00000347849 FERMT3Q86UX7 667 aa24.98■■□□□ 1.59
PTPN18-202ENST00000347849 NHSQ6T4R5 1651 aa24.98■■□□□ 1.59
PTPN18-202ENST00000347849 LAMB2P55268 1798 aa24.97■■□□□ 1.59
PTPN18-202ENST00000347849 PPFIA3O75145 1194 aa24.97■■□□□ 1.59
PTPN18-202ENST00000347849 HMGB1P09429 215 aaKnown RBP24.97■■□□□ 1.59
PTPN18-202ENST00000347849 FAM173BQ6P4H8 233 aa24.97■■□□□ 1.59
PTPN18-202ENST00000347849 NBPF3Q9H094 633 aa24.97■■□□□ 1.59
PTPN18-202ENST00000347849 LRRC4BQ9NT99 713 aa24.97■■□□□ 1.59
PTPN18-202ENST00000347849 RTCBQ9Y3I0 505 aaKnown RBP24.97■■□□□ 1.59
PTPN18-202ENST00000347849 UBE3CQ15386 1083 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 TTC6Q86TZ1 520 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 SETDB2Q96T68 719 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 CDC5LQ99459 802 aaKnown RBP24.96■■□□□ 1.59
PTPN18-202ENST00000347849 ZPR1O75312 459 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 ANKRD18AQ8IVF6 992 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 ARAP2Q8WZ64 1704 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 AGXT2Q9BYV1 514 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 MYH7P12883 1935 aa24.96■■□□□ 1.59
PTPN18-202ENST00000347849 ONECUT3O60422 494 aaPredicted RBP24.95■■□□□ 1.59
PTPN18-202ENST00000347849 TPM3P06753 285 aa24.95■■□□□ 1.59
PTPN18-202ENST00000347849 GYG1P46976 350 aa24.95■■□□□ 1.59
PTPN18-202ENST00000347849 MAGEB6Q8N7X4 407 aa24.95■■□□□ 1.59
PTPN18-202ENST00000347849 DDX11Q96FC9 970 aa24.95■■□□□ 1.59
PTPN18-202ENST00000347849 GOLGA6L6A8MZA4 724 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 CBX1P83916 185 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 IMMTQ16891 758 aaKnown RBP24.95■■□□□ 1.58
PTPN18-202ENST00000347849 PPP4R3BQ5MIZ7 849 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 ZSCAN25Q6NSZ9 544 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 SLC51AQ86UW1 340 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 NCOA5Q9HCD5 579 aaKnown RBP24.95■■□□□ 1.58
PTPN18-202ENST00000347849 CTNNA3Q9UI47 895 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 SCN7AQ01118 1682 aa24.95■■□□□ 1.58
PTPN18-202ENST00000347849 CCT2P78371 535 aaKnown RBP24.94■■□□□ 1.58
PTPN18-202ENST00000347849 SLC10A5Q5PT55 438 aa24.94■■□□□ 1.58
PTPN18-202ENST00000347849 NBPF5PQ86XG9 351 aaPredicted RBP24.94■■□□□ 1.58
PTPN18-202ENST00000347849 KLHL34Q8N239 644 aa24.94■■□□□ 1.58
PTPN18-202ENST00000347849 MINPP1Q9UNW1 487 aa24.94■■□□□ 1.58
PTPN18-202ENST00000347849 RIOK3O14730 519 aaKnown RBP24.94■■□□□ 1.58
PTPN18-202ENST00000347849 LIG1P18858 919 aa24.94■■□□□ 1.58
PTPN18-202ENST00000347849 KRT85P78386 507 aa24.94■■□□□ 1.58
PTPN18-202ENST00000347849 CHAF1AQ13111 956 aaPredicted RBP24.94■■□□□ 1.58
PTPN18-202ENST00000347849 CTDNEP1O95476 244 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 MAP3K11Q16584 847 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 FAM196AQ6ZSG2 479 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 LUZP1Q86V48 1076 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 FAM200AQ8TCP9 573 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 STRBPQ96SI9 672 aaKnown RBP24.93■■□□□ 1.58
PTPN18-202ENST00000347849 ATRNO75882 1429 aa24.93■■□□□ 1.58
PTPN18-202ENST00000347849 PFKFB2O60825 505 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 APPP05067 770 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 NUP62CLQ9H1M0 184 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 BSDC1Q9NW68 430 aaPredicted RBP24.92■■□□□ 1.58
PTPN18-202ENST00000347849 NAP1L2Q9ULW6 460 aaPredicted RBP24.92■■□□□ 1.58
PTPN18-202ENST00000347849 ZNF213O14771 459 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 PTGS1P23219 599 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 KLRK1P26718 216 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 ANTXR2P58335 489 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 CKAP2LQ8IYA6 745 aa24.92■■□□□ 1.58
PTPN18-202ENST00000347849 TRPC5Q9UL62 973 aaPredicted RBP24.92■■□□□ 1.58
PTPN18-202ENST00000347849 TBC1D10CQ8IV04 446 aa24.91■■□□□ 1.58
PTPN18-202ENST00000347849 MB21D2Q8IYB1 491 aaPredicted RBP24.91■■□□□ 1.58
PTPN18-202ENST00000347849 INCENPQ9NQS7 918 aa24.91■■□□□ 1.58
PTPN18-202ENST00000347849 MRVI1Q9Y6F6 885 aa24.91■■□□□ 1.58
PTPN18-202ENST00000347849 PDIA3P30101 505 aaKnown RBP24.91■■□□□ 1.58
PTPN18-202ENST00000347849 TYRO3Q06418 890 aa24.91■■□□□ 1.58
PTPN18-202ENST00000347849 ARMT1Q9H993 441 aa24.91■■□□□ 1.58
PTPN18-202ENST00000347849 AIDAQ96BJ3 306 aa24.9■■□□□ 1.58
PTPN18-202ENST00000347849 TFIP11Q9UBB9 837 aaKnown RBP24.9■■□□□ 1.58
PTPN18-202ENST00000347849 MBD4O95243 580 aa24.9■■□□□ 1.58
PTPN18-202ENST00000347849 NSUN7Q8NE18 718 aaKnown RBP24.9■■□□□ 1.58
PTPN18-202ENST00000347849 QTRT2Q9H974 415 aaKnown RBP24.9■■□□□ 1.58
PTPN18-202ENST00000347849 EPB41L4AQ9HCS5 686 aaPredicted RBP24.9■■□□□ 1.58
PTPN18-202ENST00000347849 PRKAB2O43741 272 aa24.89■■□□□ 1.58
PTPN18-202ENST00000347849 MAP3K12Q12852 859 aa24.89■■□□□ 1.58
PTPN18-202ENST00000347849 RAB11FIP4Q86YS3 637 aa24.89■■□□□ 1.58
PTPN18-202ENST00000347849 SBF2Q86WG5 1849 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 GOLGA6L4A6NEF3 574 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 PRC1O43663 620 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 NLRP3Q96P20 1036 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 TNMDQ9H2S6 317 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 DACT1Q9NYF0 836 aa24.89■■□□□ 1.57
PTPN18-202ENST00000347849 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms