RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 MAP2K1Q02750 393 aaPredicted RBP11.92□□□□□ -0.5
SMG7-201ENST00000347615 MICALL1Q8N3F8 863 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 ALS2CR12Q96Q35 445 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
SMG7-201ENST00000347615 UHRF1BP1LA0JNW5 1464 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 ZAP70P43403 619 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 NIP7Q9Y221 180 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMG7-201ENST00000347615 GOLGA6L10A0A0M3HER8 536 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 KRT23Q9C075 422 aa11.92□□□□□ -0.5
SMG7-201ENST00000347615 GPAA1O43292 621 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 ZNF589Q86UQ0 364 aaPredicted RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 ESR2Q92731 530 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 KCNH3Q9ULD8 1083 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 MNAT1P51948 309 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 GTPBP4Q9BZE4 634 aaKnown RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 DDX21Q9NR30 783 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMG7-201ENST00000347615 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 E7EWF7 191 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 PDE4BQ07343 736 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 PLS1Q14651 629 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 KANK3Q6NY19 840 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 ZNF215Q9UL58 517 aaPredicted RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 MAGEB6P1A0A0J9YX57 407 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 GSTTP1A0A1W2PQM5 241 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
SMG7-201ENST00000347615 GIMAP7Q8NHV1 300 aa11.91□□□□□ -0.5
SMG7-201ENST00000347615 PTPROQ16827 1216 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 KRI1Q8N9T8 703 aaKnown RBP11.9□□□□□ -0.5
SMG7-201ENST00000347615 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 ITGA6P23229 1130 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 TXLNBQ8N3L3 684 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 TRPM2O94759 1503 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 KRT2P35908 639 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 ARID5BQ14865 1188 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 AKNAD1Q5T1N1 836 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMG7-201ENST00000347615 ADGBQ8N7X0 1667 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 ZFYP08048 801 aaPredicted RBP11.9□□□□□ -0.5
SMG7-201ENST00000347615 NAPAP54920 295 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
SMG7-201ENST00000347615 MCM9Q9NXL9 1143 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 CLIC4Q9Y696 253 aa11.9□□□□□ -0.5
SMG7-201ENST00000347615 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
SMG7-201ENST00000347615 IP6K1Q92551 441 aa11.9□□□□□ -0.51
SMG7-201ENST00000347615 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.51
SMG7-201ENST00000347615 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.51
SMG7-201ENST00000347615 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.51
SMG7-201ENST00000347615 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
SMG7-201ENST00000347615 HSF2BPO75031 334 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 MRVI1Q9Y6F6 885 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 KIF5BP33176 963 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 ELP1O95163 1332 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
SMG7-201ENST00000347615 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
SMG7-201ENST00000347615 GCKRQ14397 625 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 CCDC122Q5T0U0 273 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 LRRC24Q50LG9 513 aa11.89□□□□□ -0.51
SMG7-201ENST00000347615 HGSO14964 777 aaPredicted RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 NDUFA8P51970 172 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 C11orf57Q6ZUT1 292 aaPredicted RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 EDC4Q6P2E9 1401 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 SCRN1Q12765 414 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 SEC31AO94979 1220 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 NEK11Q8NG66 645 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 GJC1P36383 396 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 KRT40Q6A162 431 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 PAIP2Q9BPZ3 127 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 BRAPQ7Z569 592 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 CTAGE1Q96RT6 745 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
SMG7-201ENST00000347615 SLF1Q9BQI6 1058 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 VPS54Q9P1Q0 977 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
SMG7-201ENST00000347615 ATP10AO60312 1499 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms