RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 GPR101Q96P66 508 aaPredicted RBP25.54■■□□□ 1.68
TSPAN3-202ENST00000346495 DUOX1Q9NRD9 1551 aa25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 PATL2C9JE40 543 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 C6orf229H3BNL8 230 aa25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 ALX1Q15699 326 aa25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 TTLL5Q6EMB2 1281 aa25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 NAA16Q6N069 864 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 INTS4Q96HW7 963 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 ZSCAN31Q96LW9 406 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 ZMYM6O95789 1325 aa25.53■■□□□ 1.68
TSPAN3-202ENST00000346495 APPP05067 770 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 STOX1Q6ZVD7 989 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 PDGFDQ9GZP0 370 aaPredicted RBP25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 ARMT1Q9H993 441 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 CD209Q9NNX6 404 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 E7EWF7 191 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 ZNF213O14771 459 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 IL1R1P14778 569 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 MPNDQ8N594 471 aa25.52■■□□□ 1.68
TSPAN3-202ENST00000346495 KIAA1551Q9HCM1 1747 aa25.51■■□□□ 1.67
TSPAN3-202ENST00000346495 MAGEB6P1A0A0J9YX57 407 aa25.51■■□□□ 1.67
TSPAN3-202ENST00000346495 NSUN4Q96CB9 384 aaKnown RBP25.51■■□□□ 1.67
TSPAN3-202ENST00000346495 A0A0G2JLW4 131 aa25.5■■□□□ 1.67
TSPAN3-202ENST00000346495 LCORLQ8N3X6 602 aa25.5■■□□□ 1.67
TSPAN3-202ENST00000346495 CNKSR1Q969H4 720 aa25.5■■□□□ 1.67
TSPAN3-202ENST00000346495 SH2B1Q9NRF2 756 aaPredicted RBP25.5■■□□□ 1.67
TSPAN3-202ENST00000346495 MECOMQ03112 1051 aa25.49■■□□□ 1.67
TSPAN3-202ENST00000346495 DPP8Q6V1X1 898 aaPredicted RBP25.49■■□□□ 1.67
TSPAN3-202ENST00000346495 MIGA1Q8NAN2 632 aa25.49■■□□□ 1.67
TSPAN3-202ENST00000346495 ANP32EQ9BTT0 268 aa25.49■■□□□ 1.67
TSPAN3-202ENST00000346495 DHX32Q7L7V1 743 aaKnown RBP25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 ADGRA1Q86SQ6 560 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 IFNL3Q8IZI9 196 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 NACAP1Q9BZK3 213 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 SLC4A4Q9Y6R1 1079 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 C10orf71Q711Q0 1435 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 PRDX5P30044 214 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 HAND2P61296 217 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 COL9A3Q14050 684 aaPredicted RBP25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 ZNF384Q8TF68 577 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 NAPBQ9H115 298 aa25.48■■□□□ 1.67
TSPAN3-202ENST00000346495 GSG1L2A8MUP6 293 aa25.47■■□□□ 1.67
TSPAN3-202ENST00000346495 LDHBP07195 334 aaKnown RBP25.47■■□□□ 1.67
TSPAN3-202ENST00000346495 DZIP1Q86YF9 867 aaKnown RBP25.47■■□□□ 1.67
TSPAN3-202ENST00000346495 JAG2Q9Y219 1238 aa25.47■■□□□ 1.67
TSPAN3-202ENST00000346495 SLX4Q8IY92 1834 aa25.47■■□□□ 1.67
TSPAN3-202ENST00000346495 DLEC1Q9Y238 1755 aa25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 CHRNA5P30532 468 aa25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 TOB2Q14106 344 aaPredicted RBP25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 TCEANC2Q96MN5 208 aa25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 RIOK1Q9BRS2 568 aaKnown RBP25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 ZC3H12CQ9C0D7 883 aaKnown RBP25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 COA1Q9GZY4 146 aa25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 EPB41L4AQ9HCS5 686 aaPredicted RBP25.46■■□□□ 1.67
TSPAN3-202ENST00000346495 EYA3Q99504 573 aa25.45■■□□□ 1.67
TSPAN3-202ENST00000346495 LARP6Q9BRS8 491 aaKnown RBP25.45■■□□□ 1.67
TSPAN3-202ENST00000346495 EXOSC10Q01780 885 aaKnown RBP25.45■■□□□ 1.66
TSPAN3-202ENST00000346495 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
TSPAN3-202ENST00000346495 ILDR1Q86SU0 546 aaPredicted RBP25.45■■□□□ 1.66
TSPAN3-202ENST00000346495 PRKAB2O43741 272 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 GSTO1P78417 241 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 NUCB2P80303 420 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 RAB3GAP1Q15042 981 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 NFKBIBQ15653 356 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 Q6ZUG5 572 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 NCOA7Q8NI08 942 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 TBC1D22AQ8WUA7 517 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 TPCN1Q9ULQ1 816 aa25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.44■■□□□ 1.66
TSPAN3-202ENST00000346495 CHD4Q14839 1912 aa25.43■■□□□ 1.66
TSPAN3-202ENST00000346495 RIMBP2O15034 1052 aa25.43■■□□□ 1.66
TSPAN3-202ENST00000346495 TDO2P48775 406 aa25.43■■□□□ 1.66
TSPAN3-202ENST00000346495 NBR1Q14596 966 aa25.43■■□□□ 1.66
TSPAN3-202ENST00000346495 FAM205AQ6ZU69 1335 aa25.43■■□□□ 1.66
TSPAN3-202ENST00000346495 LARGE1O95461 756 aa25.42■■□□□ 1.66
TSPAN3-202ENST00000346495 FGD1P98174 961 aa25.42■■□□□ 1.66
TSPAN3-202ENST00000346495 ME3Q16798 604 aa25.42■■□□□ 1.66
TSPAN3-202ENST00000346495 RALYLQ86SE5 291 aaKnown RBP25.42■■□□□ 1.66
TSPAN3-202ENST00000346495 TIAM2Q8IVF5 1701 aa25.42■■□□□ 1.66
TSPAN3-202ENST00000346495 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 TRDNQ13061 729 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 CC2D2BQ6DHV5 1058 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 NBPF3Q9H094 633 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 KIF13BQ9NQT8 1826 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 LDHCP07864 332 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 AGXT2Q9BYV1 514 aa25.41■■□□□ 1.66
TSPAN3-202ENST00000346495 WDR19Q8NEZ3 1342 aa25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 MCM5P33992 734 aa25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 GIMAP6Q6P9H5 292 aa25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 TBC1D10CQ8IV04 446 aa25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 MB21D2Q8IYB1 491 aaPredicted RBP25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 FBXL16Q8N461 479 aa25.4■■□□□ 1.66
TSPAN3-202ENST00000346495 CCDC83Q8IWF9 413 aa25.39■■□□□ 1.66
TSPAN3-202ENST00000346495 SDR42E1Q8WUS8 393 aa25.39■■□□□ 1.66
TSPAN3-202ENST00000346495 C7orf43Q8WVR3 580 aa25.39■■□□□ 1.66
TSPAN3-202ENST00000346495 CRNKL1Q9BZJ0 848 aaKnown RBP25.39■■□□□ 1.66
TSPAN3-202ENST00000346495 AATFQ9NY61 560 aaKnown RBP eCLIP25.39■■□□□ 1.66
TSPAN3-202ENST00000346495 G3V3G9 751 aa25.38■■□□□ 1.65
TSPAN3-202ENST00000346495 DCAF8Q5TAQ9 597 aa25.38■■□□□ 1.65
TSPAN3-202ENST00000346495 BRF1Q92994 677 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms