RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 NBPF3Q9H094 633 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 ANO10Q9NW15 660 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 RIPOR2Q9Y4F9 1068 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 ANKRD18BA2A2Z9 1011 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 SPTLC2O15270 562 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 CTAGE5O15320 804 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 NFXL1Q6ZNB6 911 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 CEP57L1Q8IYX8 460 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 CCDC82Q8N4S0 544 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 DCCP43146 1447 aa22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 FMR1NBQ8N0W7 255 aaPredicted RBP22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 DHX16O60231 1041 aaKnown RBP22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 CSF1RP07333 972 aa22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 CTSWP56202 376 aa22.26■■□□□ 1.15
LYSMD4-202ENST00000344791 NAA30Q147X3 362 aaPredicted RBP22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 RTEL1Q9NZ71 1219 aa22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 NUP188Q5SRE5 1749 aa22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 METAP2P50579 478 aaKnown RBP eCLIP22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 ADALQ6DHV7 355 aa22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 SLC4A9Q96Q91 983 aa22.25■■□□□ 1.15
LYSMD4-202ENST00000344791 RRP12Q5JTH9 1297 aaKnown RBP22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 CCDC102BQ68D86 513 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 LRRC8AQ8IWT6 810 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 ALG1Q9BT22 464 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 ZNF335Q9H4Z2 1342 aaPredicted RBP22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 SMC2O95347 1197 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 ADD2P35612 726 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 RIC1Q4ADV7 1423 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 CTDSPL2Q05D32 466 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 KLHL34Q8N239 644 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 AIDAQ96BJ3 306 aa22.24■■□□□ 1.15
LYSMD4-202ENST00000344791 SKILP12757 684 aa22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 CDC27P30260 824 aa22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 ZKSCAN3Q9BRR0 538 aa22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 PTPN21Q16825 1174 aa22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 PPP4R3BQ5MIZ7 849 aa22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 IQSEC3Q9UPP2 1182 aaPredicted RBP22.23■■□□□ 1.15
LYSMD4-202ENST00000344791 CCDC69A6NI79 296 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 ZNF202O95125 648 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 KIF23Q02241 960 aaPredicted RBP22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 ANGEL1Q9UNK9 670 aaKnown RBP22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 SPDYE4A6NLX3 237 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 CBX1P83916 185 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 KIAA1468Q9P260 1216 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 NWD2Q9ULI1 1742 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 NEDD4P46934 1319 aa22.22■■□□□ 1.15
LYSMD4-202ENST00000344791 WDHD1O75717 1129 aaPredicted RBP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 PDE8BO95263 885 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 PDE6AP16499 860 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 GTF2F1P35269 517 aaKnown RBP eCLIP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 ANO1Q5XXA6 986 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 CMTR1Q8N1G2 835 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 SLC3A2P08195 630 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 TRIM28Q13263 835 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 SPECC1Q5M775 1068 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 VPS37DQ86XT2 251 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 KCNG4Q8TDN1 519 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 CLIC6Q96NY7 704 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 MROH7-TTC4A0A0A0MT08 1334 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 CAVIN2O95810 425 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 PFKFB1P16118 471 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 EVCP57679 992 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 MAGEB6Q8N7X4 407 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 ARMT1Q9H993 441 aa22.21■■□□□ 1.15
LYSMD4-202ENST00000344791 ATL3Q6DD88 541 aa22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 SOS2Q07890 1332 aaPredicted RBP22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 PARP4Q9UKK3 1724 aaKnown RBP22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 TNS2Q63HR2 1409 aa22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 LMOD1P29536 600 aaPredicted RBP22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 HSP90AA4PQ58FG1 418 aa22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 NAT10Q9H0A0 1025 aaKnown RBP22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 SEC31BQ9NQW1 1179 aa22.2■■□□□ 1.14
LYSMD4-202ENST00000344791 ABCC6O95255 1503 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 PRKAB2O43741 272 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 KRT40Q6A162 431 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 APOA5Q6Q788 366 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 MTERF4Q7Z6M4 381 aaKnown RBP22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 MRFAP1L1Q96HT8 127 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 POLR3EQ9NVU0 708 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 IFNKQ9P0W0 207 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 V9GYY5 206 aaPredicted RBP22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 TMEM67Q5HYA8 995 aa22.19■■□□□ 1.14
LYSMD4-202ENST00000344791 MBD4O95243 580 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 PDCL2Q8N4E4 241 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 MIGA1Q8NAN2 632 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 PLA2G12BQ9BX93 195 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 UBN2Q6ZU65 1347 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 CYP19A1P11511 503 aaPredicted RBP22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 ATP2B1P20020 1258 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 SARM1Q6SZW1 724 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 TMC6Q7Z403 805 aa22.18■■□□□ 1.14
LYSMD4-202ENST00000344791 SLC26A6Q9BXS9 759 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms