RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 ZNF512BQ96KM6 892 aaPredicted RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 CLIC4Q9Y696 253 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 MYH3P11055 1940 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 CHMP4CQ96CF2 233 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 AIFM3Q96NN9 605 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 UTP14AQ9BVJ6 771 aaKnown RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 TRIM5Q9C035 493 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 KCNF1Q9H3M0 494 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 MROH5Q6ZUA9 1318 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 ANKRD36CQ5JPF3 1778 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 UQCRHP07919 91 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 NOLC1Q14978 699 aaKnown RBP eCLIP17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 MYH7P12883 1935 aa17.39■□□□□ 0.37
VIPAS39-202ENST00000343765 NEDD4P46934 1319 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 MBD4O95243 580 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 FGFR2P21802 821 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 SF3A1Q15459 793 aaKnown RBP17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 C11orf57Q6ZUT1 292 aaPredicted RBP17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 PCDHA7Q9UN72 937 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 PTGS1P23219 599 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 STK38Q15208 465 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 MYL10Q9BUA6 226 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 PYCARDQ9ULZ3 195 aa17.38■□□□□ 0.37
VIPAS39-202ENST00000343765 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 METAP2P50579 478 aaKnown RBP eCLIP17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 BCAMP50895 628 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 SIK1P57059 783 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 CTDSPL2Q05D32 466 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 ITPK1Q13572 414 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 NFXL1Q6ZNB6 911 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 IQSEC3Q9UPP2 1182 aaPredicted RBP17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 NIP7Q9Y221 180 aaKnown RBP eCLIP17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 DOT1LQ8TEK3 1739 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 FAM160A1Q05DH4 1040 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 PHKBQ93100 1093 aa17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 COL16A1Q07092 1604 aaPredicted RBP17.37■□□□□ 0.37
VIPAS39-202ENST00000343765 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 MAP3K12Q12852 859 aa17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 NAPBQ9H115 298 aa17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 ATRNO75882 1429 aa17.36■□□□□ 0.37
VIPAS39-202ENST00000343765 ROBO1Q9Y6N7 1651 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 PRKAB2O43741 272 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 TDRD7Q8NHU6 1098 aaKnown RBP17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 MYH15Q9Y2K3 1946 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 RRP12Q5JTH9 1297 aaKnown RBP17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 MYSM1Q5VVJ2 828 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 ENGASEQ8NFI3 743 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
VIPAS39-202ENST00000343765 GOLGA6L19H0YKK7 550 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 CDC27P30260 824 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 IGHMBP2P38935 993 aaKnown RBP17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 ZNF75DP51815 510 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 NDUFA8P51970 172 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 STX1AQ16623 288 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 MIGA1Q8NAN2 632 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 ALG1Q9BT22 464 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 ZMYM6O95789 1325 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 CTAGE5O15320 804 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 TMEM67Q5HYA8 995 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 CCDC186Q7Z3E2 898 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 IFNL3Q8IZI9 196 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 SDF4Q9BRK5 362 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 WDR19Q8NEZ3 1342 aa17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 KIF23Q02241 960 aaPredicted RBP17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
VIPAS39-202ENST00000343765 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
VIPAS39-202ENST00000343765 KCNQ2O43526 872 aa17.33■□□□□ 0.36
VIPAS39-202ENST00000343765 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms