RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 STRBPQ96SI9 672 aaKnown RBP21.97■■□□□ 1.11
HOXA9-201ENST00000343483 NAP1L2Q9ULW6 460 aaPredicted RBP21.97■■□□□ 1.11
HOXA9-201ENST00000343483 C4AP0C0L4 1744 aa21.96■■□□□ 1.11
HOXA9-201ENST00000343483 MBD4O95243 580 aa21.96■■□□□ 1.11
HOXA9-201ENST00000343483 TMEM63CQ9P1W3 806 aa21.96■■□□□ 1.11
HOXA9-201ENST00000343483 ZNF804BA4D1E1 1349 aa21.96■■□□□ 1.11
HOXA9-201ENST00000343483 MYO5AQ9Y4I1 1855 aaKnown RBP21.96■■□□□ 1.11
HOXA9-201ENST00000343483 ADRA2BP18089 450 aa21.95■■□□□ 1.11
HOXA9-201ENST00000343483 SCRN1Q12765 414 aa21.95■■□□□ 1.11
HOXA9-201ENST00000343483 RALYLQ86SE5 291 aaKnown RBP21.95■■□□□ 1.11
HOXA9-201ENST00000343483 AGXT2Q9BYV1 514 aa21.95■■□□□ 1.11
HOXA9-201ENST00000343483 CASZ1Q86V15 1759 aa21.95■■□□□ 1.1
HOXA9-201ENST00000343483 LAMA4Q16363 1823 aa21.95■■□□□ 1.1
HOXA9-201ENST00000343483 JAK2O60674 1132 aa21.95■■□□□ 1.1
HOXA9-201ENST00000343483 PFKFB2O60825 505 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 CNBD1Q8NA66 436 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 NCOA7Q8NI08 942 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 ARMT1Q9H993 441 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 ABCF2Q9UG63 623 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 CNPY2Q9Y2B0 182 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 USP48Q86UV5 1035 aa21.94■■□□□ 1.1
HOXA9-201ENST00000343483 RRAGDQ9NQL2 400 aaPredicted RBP21.94■■□□□ 1.1
HOXA9-201ENST00000343483 PRC1O43663 620 aa21.93■■□□□ 1.1
HOXA9-201ENST00000343483 PDIA4P13667 645 aaKnown RBP21.93■■□□□ 1.1
HOXA9-201ENST00000343483 MCM5P33992 734 aa21.93■■□□□ 1.1
HOXA9-201ENST00000343483 CDC37L1Q7L3B6 337 aa21.93■■□□□ 1.1
HOXA9-201ENST00000343483 NBPF3Q9H094 633 aa21.93■■□□□ 1.1
HOXA9-201ENST00000343483 TM4SF1P30408 202 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 MB21D2Q8IYB1 491 aaPredicted RBP21.92■■□□□ 1.1
HOXA9-201ENST00000343483 DDX11Q96FC9 970 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 FAM84BQ96KN1 310 aaPredicted RBP21.92■■□□□ 1.1
HOXA9-201ENST00000343483 GPHNQ9NQX3 736 aaPredicted RBP21.92■■□□□ 1.1
HOXA9-201ENST00000343483 KLRK1P26718 216 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 CCT2P78371 535 aaKnown RBP21.92■■□□□ 1.1
HOXA9-201ENST00000343483 TRDNQ13061 729 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 TBC1D10CQ8IV04 446 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 ANP32BQ92688 251 aaKnown RBP21.92■■□□□ 1.1
HOXA9-201ENST00000343483 ANKRD2Q9GZV1 360 aa21.92■■□□□ 1.1
HOXA9-201ENST00000343483 DOCK2Q92608 1830 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 PATL2C9JE40 543 aaKnown RBP21.91■■□□□ 1.1
HOXA9-201ENST00000343483 FERMT3Q86UX7 667 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 MIGA1Q8NAN2 632 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 RAI14Q9P0K7 980 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 COL1A1P02452 1464 aaPredicted RBP21.91■■□□□ 1.1
HOXA9-201ENST00000343483 SYCE3A1L190 88 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 PDIA3P30101 505 aaKnown RBP21.91■■□□□ 1.1
HOXA9-201ENST00000343483 SLC15A2Q16348 729 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 LRSAM1Q6UWE0 723 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 LCORLQ8N3X6 602 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 NAPBQ9H115 298 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 NCOA5Q9HCD5 579 aaKnown RBP21.91■■□□□ 1.1
HOXA9-201ENST00000343483 A0A1B0GUL6 1792 aa21.91■■□□□ 1.1
HOXA9-201ENST00000343483 FIBPO43427 364 aa21.9■■□□□ 1.1
HOXA9-201ENST00000343483 GADD45BO75293 160 aaPredicted RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 DNM1Q05193 864 aaKnown RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 CCDC173Q0VFZ6 552 aa21.9■■□□□ 1.1
HOXA9-201ENST00000343483 FBXL16Q8N461 479 aa21.9■■□□□ 1.1
HOXA9-201ENST00000343483 ZNF274Q96GC6 653 aaPredicted RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 EPB41L4AQ9HCS5 686 aaPredicted RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 DENND2AQ9ULE3 1009 aa21.9■■□□□ 1.1
HOXA9-201ENST00000343483 TNRC6CQ9HCJ0 1690 aaKnown RBP21.9■■□□□ 1.1
HOXA9-201ENST00000343483 GYS1P13807 737 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 CYP7A1P22680 504 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 ANTXR2P58335 489 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 IFNL3Q8IZI9 196 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 FAM184AQ8NB25 1140 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 TMEM87AQ8NBN3 555 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 SYAP1Q96A49 352 aaPredicted RBP21.89■■□□□ 1.1
HOXA9-201ENST00000343483 AKT1S1Q96B36 256 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 TRIM44Q96DX7 344 aaPredicted RBP21.89■■□□□ 1.1
HOXA9-201ENST00000343483 RBSNQ9H1K0 784 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 TFCP2L1Q9NZI6 479 aa21.89■■□□□ 1.1
HOXA9-201ENST00000343483 PRKAB2O43741 272 aa21.89■■□□□ 1.09
HOXA9-201ENST00000343483 ALX1Q15699 326 aa21.89■■□□□ 1.09
HOXA9-201ENST00000343483 NSUN7Q8NE18 718 aaKnown RBP21.89■■□□□ 1.09
HOXA9-201ENST00000343483 SLC4A4Q9Y6R1 1079 aa21.89■■□□□ 1.09
HOXA9-201ENST00000343483 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 FBXO33Q7Z6M2 555 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 STK32BQ9NY57 414 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 TCHHQ07283 1943 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 ZMYM6O95789 1325 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 PNPLA7Q6ZV29 1317 aa21.88■■□□□ 1.09
HOXA9-201ENST00000343483 PTPDC1A2A3K4 754 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 GSG1L2A8MUP6 293 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 GNAT2P19087 354 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 ADGRA1Q86SQ6 560 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 SMARCC2Q8TAQ2 1214 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 CTDNEP1O95476 244 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 TDO2P48775 406 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 TPRNQ4KMQ1 711 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 NACAP1Q9BZK3 213 aa21.87■■□□□ 1.09
HOXA9-201ENST00000343483 KLF18A0A0U1RQI7 1052 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 H3BQV1 296 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
HOXA9-201ENST00000343483 EVCP57679 992 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 GRAPQ13588 217 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 IFFO2Q5TF58 517 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 GRAPLQ8TC17 118 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms