RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 KCNJ14Q9UNX9 436 aa18.79■□□□□ 0.6
RDX-201ENST00000343115 ADCY9O60503 1353 aa18.79■□□□□ 0.6
RDX-201ENST00000343115 CCDC194A0A1B0GVG4 234 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 PFKFB2O60825 505 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 PDIA3P30101 505 aaKnown RBP18.78■□□□□ 0.6
RDX-201ENST00000343115 TCIRG1Q13488 830 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 KRT40Q6A162 431 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 CABP5Q9NP86 173 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 GJB4Q9NTQ9 266 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 CCDC12Q8WUD4 166 aaPredicted RBP18.78■□□□□ 0.6
RDX-201ENST00000343115 AK9Q5TCS8 1911 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 COL3A1P02461 1466 aaPredicted RBP18.78■□□□□ 0.6
RDX-201ENST00000343115 N4BP3O15049 544 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 KRT18P05783 430 aaKnown RBP18.78■□□□□ 0.6
RDX-201ENST00000343115 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
RDX-201ENST00000343115 ZPR1O75312 459 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.6
RDX-201ENST00000343115 MYSM1Q5VVJ2 828 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 VWDEQ8N2E2 1590 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 PCDHA7Q9UN72 937 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 MYOM1P52179 1685 aa18.77■□□□□ 0.6
RDX-201ENST00000343115 KIF5CO60282 957 aa18.77■□□□□ 0.59
RDX-201ENST00000343115 FAM193AP78312 1265 aa18.77■□□□□ 0.59
RDX-201ENST00000343115 CCDC94Q9BW85 323 aaPredicted RBP18.77■□□□□ 0.59
RDX-201ENST00000343115 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.59
RDX-201ENST00000343115 CYP27B1O15528 508 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 KIAA1328Q86T90 577 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 NSUN7Q8NE18 718 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 ASAP1Q9ULH1 1129 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 LMTK3Q96Q04 1460 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 TRIM75PA6NK02 468 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 ANKRD18AQ8IVF6 992 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 TOB2Q14106 344 aaPredicted RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 PTPN21Q16825 1174 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 MAST3O60307 1309 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 MTX1Q13505 466 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 ENOX2Q16206 610 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 NOM1Q5C9Z4 860 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 CCDC102AQ96A19 550 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
RDX-201ENST00000343115 CLIC4Q9Y696 253 aa18.76■□□□□ 0.59
RDX-201ENST00000343115 STAMQ92783 540 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 UBA7P41226 1012 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 MYL5Q02045 173 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 KCNH3Q9ULD8 1083 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 CCDC66A2RUB6 948 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 POLR2DO15514 142 aaKnown RBP18.75■□□□□ 0.59
RDX-201ENST00000343115 DNA2P51530 1060 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 NDUFA8P51970 172 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 KRI1Q8N9T8 703 aaKnown RBP18.75■□□□□ 0.59
RDX-201ENST00000343115 PLIN2Q99541 437 aa18.75■□□□□ 0.59
RDX-201ENST00000343115 AXDND1Q5T1B0 1012 aaPredicted RBP18.74■□□□□ 0.59
RDX-201ENST00000343115 USP31Q70CQ4 1352 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 PDLIM2Q96JY6 352 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 RUFY1Q96T51 708 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 FANCCQ00597 558 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 C11orf57Q6ZUT1 292 aaPredicted RBP18.74■□□□□ 0.59
RDX-201ENST00000343115 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
RDX-201ENST00000343115 ACBD3Q9H3P7 528 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 GREM2Q9H772 168 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 LZTFL1Q9NQ48 299 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
RDX-201ENST00000343115 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
RDX-201ENST00000343115 ZMYM1Q5SVZ6 1142 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 TRMT44Q8IYL2 757 aaKnown RBP18.73■□□□□ 0.59
RDX-201ENST00000343115 M0R2C6 588 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 ZNF174Q15697 407 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 ZNF274Q96GC6 653 aaPredicted RBP18.73■□□□□ 0.59
RDX-201ENST00000343115 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 ELP1O95163 1332 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 SH3TC1Q8TE82 1336 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 IDEP14735 1019 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 TERF1P54274 439 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 TMTC2Q8N394 836 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 CACTINQ8WUQ7 758 aaKnown RBP18.73■□□□□ 0.59
RDX-201ENST00000343115 AIFM3Q96NN9 605 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 KIAA1468Q9P260 1216 aa18.73■□□□□ 0.59
RDX-201ENST00000343115 PNOCQ13519 176 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 DDB1Q16531 1140 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.72■□□□□ 0.59
RDX-201ENST00000343115 SYNE4Q8N205 404 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 KAT14Q9H8E8 782 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 PHKA1P46020 1223 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 ADALQ6DHV7 355 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 PFKFB1P16118 471 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 ZSCAN29Q8IWY8 852 aaPredicted RBP18.72■□□□□ 0.59
RDX-201ENST00000343115 SNAP23O00161 211 aa18.72■□□□□ 0.59
RDX-201ENST00000343115 PUM3Q15397 648 aaKnown RBP18.72■□□□□ 0.59
RDX-201ENST00000343115 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms