RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 ARMT1Q9H993 441 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 PFKFB2O60825 505 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 NR1I2O75469 434 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 GTF2F1P35269 517 aaKnown RBP eCLIP8.2□□□□□ -1.1
VCAN-202ENST00000342785 STAT6P42226 847 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 HAUS7Q99871 368 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 ARFGAP3Q9NP61 516 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 PSMA7O14818 248 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CCDC175P0C221 793 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CALM1P0DP23 149 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CALM2P0DP24 149 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CALM3P0DP25 149 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 MAP9Q49MG5 647 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 LRRC24Q50LG9 513 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 SLF2Q8IX21 1173 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 IQUBQ8NA54 791 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 PI4K2BQ8TCG2 481 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 MCM9Q9NXL9 1143 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 IGSF3O75054 1194 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 KIF2CQ99661 725 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 SEPT11Q9NVA2 429 aaKnown RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 BTG4Q9NY30 223 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.1
VCAN-202ENST00000342785 KIF20AO95235 890 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CALML3P27482 149 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 FANCCQ00597 558 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 PUM3Q15397 648 aaKnown RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 UBA5Q9GZZ9 404 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CDC42BPAQ5VT25 1732 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 PDE8AO60658 829 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 SASH1O94885 1247 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 TSPY3P0CV98 308 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 TSPY8P0CW00 308 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 LRMPQ12912 555 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 CCDC40Q4G0X9 1142 aa8.2□□□□□ -1.1
VCAN-202ENST00000342785 ZNF589Q86UQ0 364 aaPredicted RBP8.2□□□□□ -1.1
VCAN-202ENST00000342785 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 LARGE1O95461 756 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 ADD1P35611 737 aaKnown RBP8.19□□□□□ -1.1
VCAN-202ENST00000342785 ERLIN2O94905 339 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 ADALQ6DHV7 355 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.19□□□□□ -1.12e-7■■■■■ 28.3
VCAN-202ENST00000342785 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
VCAN-202ENST00000342785 KARSQ15046 597 aaKnown RBP8.19□□□□□ -1.1
VCAN-202ENST00000342785 HEATR3Q7Z4Q2 680 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 LPIN2Q92539 896 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 LZTFL1Q9NQ48 299 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CLTCL1P53675 1640 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 ERBB4Q15303 1308 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 DEXIO95424 95 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 ZNF532Q9HCE3 1301 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 KAT6BQ8WYB5 2073 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CTAGE15A4D2H0 777 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 PPP1R12BO60237 982 aaPredicted RBP8.19□□□□□ -1.1
VCAN-202ENST00000342785 FGAP02671 866 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CTAGE8P0CG41 777 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 SPECC1Q5M775 1068 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CTAGE6Q86UF2 777 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 CTAGE4Q8IX94 777 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 KLHL34Q8N239 644 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 TMOD2Q9NZR1 351 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 RTL9Q8NET4 1388 aa8.19□□□□□ -1.1
VCAN-202ENST00000342785 ASIC1P78348 528 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 FAM114A1Q8IWE2 563 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 JADE2Q9NQC1 790 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 NFE2L3Q9Y4A8 694 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ADCY10Q96PN6 1610 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 NECTIN1Q15223 517 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ZNF174Q15697 407 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 PUS3Q9BZE2 481 aaKnown RBP8.18□□□□□ -1.1
VCAN-202ENST00000342785 EXOC1Q9NV70 894 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 TET3O43151 1660 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ARAP3Q8WWN8 1544 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 MAP3K4Q9Y6R4 1608 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ERVV-2B6SEH9 535 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 CUTAO60888 179 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 KRT2P35908 639 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 MCM6Q14566 821 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 TCERG1LQ5VWI1 586 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 JAG2Q9Y219 1238 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 RFC4P35249 363 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 FBXO18Q8NFZ0 1043 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ERO1AQ96HE7 468 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 FEZ1Q99689 392 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 BAG1Q99933 345 aaPredicted RBP8.18□□□□□ -1.1
VCAN-202ENST00000342785 UNC13BO14795 1591 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 MCM3P25205 808 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 MCM7P33993 719 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms