RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 XAGE2Q96GT9 111 aa5.06□□□□□ -1.6
BPTF-204ENST00000342579 MKNK2Q9HBH9 465 aa5.06□□□□□ -1.6
BPTF-204ENST00000342579 AS3MTQ9HBK9 375 aa5.06□□□□□ -1.6
BPTF-204ENST00000342579 ZNF541Q9H0D2 1346 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 KCNA3P22001 575 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 TRDNQ13061 729 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 INTS3Q68E01 1043 aaKnown RBP5.05□□□□□ -1.6
BPTF-204ENST00000342579 RUFY2Q8WXA3 655 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 FZD9O00144 591 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 CRKP46108 304 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 CTCFP49711 727 aaPredicted RBP5.05□□□□□ -1.6
BPTF-204ENST00000342579 ZNF444Q8N0Y2 327 aaPredicted RBP5.05□□□□□ -1.6
BPTF-204ENST00000342579 BBXQ8WY36 941 aaPredicted RBP5.05□□□□□ -1.6
BPTF-204ENST00000342579 CAPNS2Q96L46 248 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 BOLA2Q9H3K6 86 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 TDRD3Q9H7E2 651 aaKnown RBP5.05□□□□□ -1.6
BPTF-204ENST00000342579 CA12O43570 354 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 CIAO1O76071 339 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 ALDH1A1P00352 501 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 CSF1RP07333 972 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 HOXD10P28358 340 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 RGMBQ6NW40 437 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 CREBZFQ9NS37 354 aa5.05□□□□□ -1.6
BPTF-204ENST00000342579 MED23Q9ULK4 1368 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 KLRG2A4D1S0 409 aaPredicted RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 UBE2Q2LH0YL09 131 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 IRX3P78415 501 aaPredicted RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 TMEM106CQ9BVX2 250 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 ZNF341Q9BYN7 854 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 SUGT1Q9Y2Z0 365 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 ADCY9O60503 1353 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 GOLIM4O00461 696 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 FKBP1BP68106 108 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 RASA3Q14644 834 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 REM2Q8IYK8 340 aaPredicted RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 ANKRD13AQ8IZ07 590 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 SPATA5Q8NB90 893 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 RHPN1Q8TCX5 695 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 DEFB129Q9H1M3 183 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.04□□□□□ -1.6
BPTF-204ENST00000342579 COPRSQ9NQ92 184 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 IVNS1ABPQ9Y6Y0 642 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 ERICH2A1L162 156 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 MINDY4BA8MYZ0 360 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 MYCNP04198 464 aaPredicted RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 VIL1P09327 827 aaKnown RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 RRP1P56182 461 aaKnown RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 GADL1Q6ZQY3 521 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 IPO4Q8TEX9 1081 aaKnown RBP5.04□□□□□ -1.6
BPTF-204ENST00000342579 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 SH2D4AQ9H788 454 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 PPP2R3BQ9Y5P8 575 aa5.04□□□□□ -1.6
BPTF-204ENST00000342579 KCPQ6ZWJ8 1503 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 MAGEB6P1A0A0J9YX57 407 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 SNAP23O00161 211 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 TRPA1O75762 1119 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 GLRX3O76003 335 aaKnown RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 SLC9C2Q5TAH2 1124 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 WRNIP1Q96S55 665 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 USP54Q70EL1 1684 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 ADM5C9JUS6 153 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 HIP1O00291 1037 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 KIF3CO14782 793 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 BTDP43251 543 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 TAF1CQ15572 869 aaPredicted RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 RRP12Q5JTH9 1297 aaKnown RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 PPP4R3BQ5MIZ7 849 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 PRAMEF18Q5VWM3 479 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 CYP4F22Q6NT55 531 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 STK11IPQ8N1F8 1099 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 GCC1Q96CN9 775 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 CDCA5Q96FF9 252 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 L3MBTL3Q96JM7 780 aaPredicted RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 FAM84BQ96KN1 310 aaPredicted RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 UPF2Q9HAU5 1272 aaKnown RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 ZFYVE28Q9HCC9 887 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 FMNL1O95466 1100 aaPredicted RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 RGS3P49796 1198 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 INHBEP58166 350 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 MAP3K9P80192 1104 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 FOXO4P98177 505 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 SLC4A8Q2Y0W8 1093 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 TNNI3KQ59H18 835 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 EPHA10Q5JZY3 1008 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 SYNE3Q6ZMZ3 975 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 MAGEB6Q8N7X4 407 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 PLCD4Q9BRC7 762 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 RTFDC1Q9BY42 306 aaPredicted RBP5.03□□□□□ -1.6
BPTF-204ENST00000342579 ECHDC1Q9NTX5 307 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 MCM9Q9NXL9 1143 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 PNMA3Q9UL41 463 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 FPGT-TNNI3KV9GXZ4 949 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 PKD1L3Q7Z443 1732 aa5.03□□□□□ -1.6
BPTF-204ENST00000342579 MANSC4A6NHS7 340 aaPredicted RBP5.02□□□□□ -1.61
BPTF-204ENST00000342579 TRAF5O00463 557 aa5.02□□□□□ -1.61
BPTF-204ENST00000342579 OSBPP22059 807 aa5.02□□□□□ -1.61
BPTF-204ENST00000342579 PHKA1P46020 1223 aa5.02□□□□□ -1.61
BPTF-204ENST00000342579 MIGA2Q7L4E1 593 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms