RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NAA16Q6N069 864 aaPredicted RBP14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 GUCA1BQ9UMX6 200 aa14.22□□□□□ -0.13
SNRNP48-201ENST00000342415 USP27XA6NNY8 438 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 SLC5A1P13866 664 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 PIP4K2BP78356 416 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 NSUN7Q8NE18 718 aaKnown RBP14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 KCNF1Q9H3M0 494 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 JADE2Q9NQC1 790 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 TMEM2Q9UHN6 1383 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 FGAP02671 866 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 TDRD7Q8NHU6 1098 aaKnown RBP14.21□□□□□ -0.13
SNRNP48-201ENST00000342415 CYP7A1P22680 504 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 CCDC148Q8NFR7 591 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 EEF2KMTQ96G04 330 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 FANCLQ9NW38 375 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 VPS18Q9P253 973 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 ABCC3O15438 1527 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 QRICH2Q9H0J4 1663 aa14.21□□□□□ -0.14
SNRNP48-201ENST00000342415 ATP7BP35670 1465 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 MBD4O95243 580 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ERCC3P19447 782 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 CATIPQ7Z7H3 387 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 DIS3L2Q8IYB7 885 aaKnown RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 VPS16Q9H269 839 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 KRT18P05783 430 aaKnown RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 CCDC175P0C221 793 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 IDEP14735 1019 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 SETQ01105 290 aaPredicted RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ADALQ6DHV7 355 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 GDAP1L1Q96MZ0 367 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 HINFPQ9BQA5 517 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ANGEL1Q9UNK9 670 aaKnown RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 USP6P35125 1406 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 PFKFB2O60825 505 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 KIF20AO95235 890 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ATP1A3P13637 1013 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ZNF174Q15697 407 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 KRI1Q8N9T8 703 aaKnown RBP14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 RABEP2Q9H5N1 569 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 SHROOM2Q13796 1616 aa14.2□□□□□ -0.14
SNRNP48-201ENST00000342415 ADORA1P30542 326 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 C10orf67Q8IYJ2 551 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 CEP89Q96ST8 783 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 ARMT1Q9H993 441 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 ELP1O95163 1332 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 VWA3AA6NCI4 1184 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 CAPN2P17655 700 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 NCBP1Q09161 790 aaKnown RBP14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 TTF1Q15361 905 aaPredicted RBP14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 MKNK2Q9HBH9 465 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 RSPH14Q9UHP6 348 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 YEATS4O95619 227 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 NLRP12P59046 1061 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 TMEM87AQ8NBN3 555 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 KDRP35968 1356 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 RPAP1Q9BWH6 1393 aaPredicted RBP14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 TRIM75PA6NK02 468 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 UBA7P41226 1012 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 MTIF2P46199 727 aaKnown RBP14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
SNRNP48-201ENST00000342415 CPSF1Q10570 1443 aaKnown RBP14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 TSPY2A6NKD2 308 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 RESTQ13127 1097 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 DNAJC21Q5F1R6 531 aaKnown RBP14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 DMTNQ08495 405 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 APPBP2Q92624 585 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 TRIM47Q96LD4 638 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 HAUS7Q99871 368 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 SEC31AO94979 1220 aaKnown RBP14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■□□□□ 9.2
SNRNP48-201ENST00000342415 ADCY9O60503 1353 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 LAMC1P11047 1609 aa14.18□□□□□ -0.14
SNRNP48-201ENST00000342415 MCM7P33993 719 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 TDRD12Q587J7 1177 aaKnown RBP14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 NEK11Q8NG66 645 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 GOLGA1Q92805 767 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 ITGA6P23229 1130 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 FAM107BQ9H098 131 aa14.17□□□□□ -0.14
SNRNP48-201ENST00000342415 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms