RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SV2BQ7L1I2 683 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 ANKS4BQ8N8V4 417 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 SRRTQ9BXP5 876 aaKnown RBP17.15■□□□□ 0.34
COL11A2-201ENST00000341947 SAP30BPQ9UHR5 308 aaKnown RBP17.15■□□□□ 0.34
COL11A2-201ENST00000341947 STX17P56962 302 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
COL11A2-201ENST00000341947 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 TRERF1Q96PN7 1200 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
COL11A2-201ENST00000341947 GOLGA1Q92805 767 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 FNBP1Q96RU3 617 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 PKD2L1Q9P0L9 805 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 EPB41P11171 864 aaKnown RBP17.15■□□□□ 0.34
COL11A2-201ENST00000341947 RAPGEF1Q13905 1077 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 CCDC114Q96M63 670 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 CFAP57Q96MR6 1250 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 PLIN2Q99541 437 aa17.15■□□□□ 0.34
COL11A2-201ENST00000341947 KRT5P13647 590 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 CNBD1Q8NA66 436 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 TSGA10Q9BZW7 698 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 MTRF1LQ9UGC7 380 aaKnown RBP17.14■□□□□ 0.33
COL11A2-201ENST00000341947 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
COL11A2-201ENST00000341947 SLC8A3P57103 927 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 SEL1L2Q5TEA6 688 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 ATRIPQ8WXE1 791 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 KIFAP3Q92845 792 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 JAKMIP2Q96AA8 810 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 MBD4O95243 580 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 HELLSQ9NRZ9 838 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 DYNC1I1O14576 645 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 BIRC3Q13489 604 aa17.14■□□□□ 0.33
COL11A2-201ENST00000341947 UFL1O94874 794 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 BRDTQ58F21 947 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-201ENST00000341947 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 ZNF830Q96NB3 372 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-201ENST00000341947 GUCA1BQ9UMX6 200 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 SH3BP5O60239 455 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 AK2P54819 239 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 RXRAP19793 462 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 SMTNP53814 917 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
COL11A2-201ENST00000341947 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
COL11A2-201ENST00000341947 STX10O60499 249 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 HARSP12081 509 aaKnown RBP17.12■□□□□ 0.33
COL11A2-201ENST00000341947 ALDH3A1P30838 453 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 PPP1R2P41236 205 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 TYRO3Q06418 890 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 TNNC1P63316 161 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 MCM6Q14566 821 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
COL11A2-201ENST00000341947 CFAP157Q5JU67 520 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
COL11A2-201ENST00000341947 PLCD1P51178 756 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 ZKSCAN3Q9BRR0 538 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
COL11A2-201ENST00000341947 MAST3O60307 1309 aa17.12■□□□□ 0.33
COL11A2-201ENST00000341947 NOLC1Q14978 699 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL11A2-201ENST00000341947 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 TUBB4BP68371 445 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 CALCOCO2Q13137 446 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL11A2-201ENST00000341947 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 CCDC25Q86WR0 208 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 RNF34Q969K3 372 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 AGTPBP1Q9UPW5 1226 aa17.11■□□□□ 0.33
COL11A2-201ENST00000341947 VWA3AA6NCI4 1184 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 IVLP07476 585 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 GPHNQ9NQX3 736 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 ZNF174Q15697 407 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 SNX21Q969T3 373 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 IFT74Q96LB3 600 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 DUOX2Q9NRD8 1548 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 CHMP2AO43633 222 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 STRN3Q13033 797 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 IFT81Q8WYA0 676 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-201ENST00000341947 ABCC1P33527 1531 aa17.1■□□□□ 0.33
COL11A2-201ENST00000341947 ZWINTO95229 277 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms