RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 IFIT1P09914 478 aaKnown RBP16.37■□□□□ 0.21
NECTIN1-203ENST00000341398 CHAF1AQ13111 956 aaPredicted RBP16.37■□□□□ 0.21
NECTIN1-203ENST00000341398 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
NECTIN1-203ENST00000341398 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
NECTIN1-203ENST00000341398 TCP10L2B9ZVM9 353 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 TEKT1Q969V4 418 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 USP44Q9H0E7 712 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 TMOD2Q9NZR1 351 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 IQSEC3Q9UPP2 1182 aaPredicted RBP16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 SUGT1Q9Y2Z0 365 aa16.36■□□□□ 0.21
NECTIN1-203ENST00000341398 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
NECTIN1-203ENST00000341398 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
NECTIN1-203ENST00000341398 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
NECTIN1-203ENST00000341398 HOOK2Q96ED9 719 aa16.35■□□□□ 0.21
NECTIN1-203ENST00000341398 MAST3O60307 1309 aa16.35■□□□□ 0.21
NECTIN1-203ENST00000341398 SSC5DA1L4H1 1573 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 LAMB1P07942 1786 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 R3HDMLQ9H3Y0 253 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 CSADQ9Y600 493 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
NECTIN1-203ENST00000341398 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 SLC5A1P13866 664 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 BCAMP50895 628 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 ARHGEF6Q15052 776 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 OPTNQ96CV9 577 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 SMC4Q9NTJ3 1288 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 AOX1Q06278 1338 aa16.33■□□□□ 0.2
NECTIN1-203ENST00000341398 TESPA1A2RU30 521 aaPredicted RBP16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 ZDHHC15Q96MV8 337 aa16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 TMEM39BQ9GZU3 492 aa16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 MYH13Q9UKX3 1938 aa16.32■□□□□ 0.2
NECTIN1-203ENST00000341398 EYA2O00167 538 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 GTF2A2P52657 109 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 FKBP1CQ5VVH2 108 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 FAM83AQ86UY5 434 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 LPIN2Q92539 896 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
NECTIN1-203ENST00000341398 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 FGFR2P21802 821 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 GJA5P36382 358 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 SP3Q02447 781 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 CRHR2Q13324 411 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 HHIPL2Q6UWX4 724 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 OTOP1Q7RTM1 612 aa16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
NECTIN1-203ENST00000341398 GRIK5Q16478 980 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 EFCC1Q9HA90 598 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 ZFYVE28Q9HCC9 887 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
NECTIN1-203ENST00000341398 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 VGLL4Q14135 290 aa16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 CCL15Q16663 113 aa16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 PTPN18Q99952 460 aa16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
NECTIN1-203ENST00000341398 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 TAF1CQ15572 869 aaPredicted RBP16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 ERO1BQ86YB8 467 aa16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 OTUD5Q96G74 571 aa16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
NECTIN1-203ENST00000341398 CIAO1O76071 339 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 CETPP11597 493 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 CACNB3P54284 484 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 WRNIP1Q96S55 665 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 NOB1Q9ULX3 412 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 PRPF38BQ5VTL8 546 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 ATG9AQ7Z3C6 839 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 BRI3BPQ8WY22 251 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 SIL1Q9H173 461 aa16.26■□□□□ 0.19
NECTIN1-203ENST00000341398 SPDYE5A6NIY4 337 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 SEMA3EO15041 775 aa16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 LDHBP07195 334 aaKnown RBP16.25■□□□□ 0.19
NECTIN1-203ENST00000341398 IL15P40933 162 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms