RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 HSPA2P54652 639 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 TYRO3Q06418 890 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 MCM6Q14566 821 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 CCDC25Q86WR0 208 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
TNC-201ENST00000341037 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 GPATCH8Q9UKJ3 1502 aaKnown RBP12.85□□□□□ -0.35
TNC-201ENST00000341037 GNA11P29992 359 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 EIF2AK4Q9P2K8 1649 aaKnown RBP12.85□□□□□ -0.35
TNC-201ENST00000341037 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
TNC-201ENST00000341037 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
TNC-201ENST00000341037 IFT81Q8WYA0 676 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 MAK16Q9BXY0 300 aaKnown RBP12.84□□□□□ -0.35
TNC-201ENST00000341037 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 CPA1P15085 419 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 ITGA6P23229 1130 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 KRT83P78385 493 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 KIF5AQ12840 1032 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 HS2ST1Q7LGA3 356 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 CCDC42Q96M95 316 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 PPP1R7Q15435 360 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 CNBD1Q8NA66 436 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 EYA1Q99502 592 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 B4E1Z4 1266 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 KRT9P35527 623 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
TNC-201ENST00000341037 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 CEP83Q9Y592 693 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
TNC-201ENST00000341037 DDX39AO00148 427 aaKnown RBP12.84□□□□□ -0.35
TNC-201ENST00000341037 NOLC1Q14978 699 aaKnown RBP eCLIP12.84□□□□□ -0.35
TNC-201ENST00000341037 PSMC4P43686 418 aa12.83□□□□□ -0.35
TNC-201ENST00000341037 FCHSD1Q86WN1 690 aa12.83□□□□□ -0.35
TNC-201ENST00000341037 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.35
TNC-201ENST00000341037 PICK1Q9NRD5 415 aa12.83□□□□□ -0.35
TNC-201ENST00000341037 LMTK3Q96Q04 1460 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 DHX32Q7L7V1 743 aaKnown RBP12.83□□□□□ -0.36
TNC-201ENST00000341037 SV2BQ7L1I2 683 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 GPATCH11Q8N954 259 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 FRMD4BQ9Y2L6 1034 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
TNC-201ENST00000341037 TMOD4Q9NZQ9 345 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 KRT86O43790 486 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 PRKG1Q13976 671 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
TNC-201ENST00000341037 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
TNC-201ENST00000341037 RHOXF2BP0C7M4 288 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 RHOXF2Q9BQY4 288 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 ATP2A1O14983 1001 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 MSANTD4Q8NCY6 345 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 GOLGA1Q92805 767 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 GCP02774 474 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 BIRC3Q13489 604 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 IPO4Q8TEX9 1081 aaKnown RBP12.82□□□□□ -0.36
TNC-201ENST00000341037 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
TNC-201ENST00000341037 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
TNC-201ENST00000341037 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
TNC-201ENST00000341037 CCDC6Q16204 474 aa12.82□□□□□ -0.36
TNC-201ENST00000341037 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
TNC-201ENST00000341037 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 DNAJC21Q5F1R6 531 aaKnown RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 KCNK9Q9NPC2 374 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
TNC-201ENST00000341037 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 VAMP4O75379 141 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 RLBP1P12271 317 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 CHMLP26374 656 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 HSPA4P34932 840 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 FNBP1Q96RU3 617 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 OPA1O60313 960 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 TAF5LO75529 589 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
TNC-201ENST00000341037 CTDSPL2Q05D32 466 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 RASA3Q14644 834 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
TNC-201ENST00000341037 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms