RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 COL1A1P02452 1464 aaPredicted RBP20.71■□□□□ 0.91
CLDN4-201ENST00000340958 CCDC88AQ3V6T2 1871 aa20.71■□□□□ 0.91
CLDN4-201ENST00000340958 TCRBV5S4A2TA0A5A2 114 aa20.71■□□□□ 0.91
CLDN4-201ENST00000340958 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
CLDN4-201ENST00000340958 HSP90AA1P07900 732 aaKnown RBP20.7■□□□□ 0.9
CLDN4-201ENST00000340958 NAA16Q6N069 864 aaPredicted RBP20.7■□□□□ 0.9
CLDN4-201ENST00000340958 JAKMIP1Q96N16 626 aaKnown RBP20.7■□□□□ 0.9
CLDN4-201ENST00000340958 UPF3BQ9BZI7 483 aaKnown RBP20.7■□□□□ 0.9
CLDN4-201ENST00000340958 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
CLDN4-201ENST00000340958 MYH7P12883 1935 aa20.7■□□□□ 0.9
CLDN4-201ENST00000340958 PSMA5P28066 241 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 DZIP1Q86YF9 867 aaKnown RBP20.69■□□□□ 0.9
CLDN4-201ENST00000340958 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
CLDN4-201ENST00000340958 RASSF7Q02833 373 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 SPRYD3Q8NCJ5 442 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 COA1Q9GZY4 146 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 LRRC37AA6NMS7 1700 aa20.69■□□□□ 0.9
CLDN4-201ENST00000340958 MBD4O95243 580 aa20.68■□□□□ 0.9
CLDN4-201ENST00000340958 IL1R1P14778 569 aa20.68■□□□□ 0.9
CLDN4-201ENST00000340958 KRT32Q14532 448 aa20.68■□□□□ 0.9
CLDN4-201ENST00000340958 MIGA1Q8NAN2 632 aa20.68■□□□□ 0.9
CLDN4-201ENST00000340958 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
CLDN4-201ENST00000340958 NFKBIEO00221 500 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 LDHBP07195 334 aaKnown RBP20.67■□□□□ 0.9
CLDN4-201ENST00000340958 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 KCNB2Q92953 911 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 ARMT1Q9H993 441 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 MAGEB6P1A0A0J9YX57 407 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 CD2BP2O95400 341 aaKnown RBP20.67■□□□□ 0.9
CLDN4-201ENST00000340958 IL17RAQ96F46 866 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 MYH13Q9UKX3 1938 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 MYO5AQ9Y4I1 1855 aaKnown RBP20.67■□□□□ 0.9
CLDN4-201ENST00000340958 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
CLDN4-201ENST00000340958 ZBTB22O15209 634 aa20.66■□□□□ 0.9
CLDN4-201ENST00000340958 PRDX5P30044 214 aa20.66■□□□□ 0.9
CLDN4-201ENST00000340958 MECOMQ03112 1051 aa20.66■□□□□ 0.9
CLDN4-201ENST00000340958 IMMTQ16891 758 aaKnown RBP20.66■□□□□ 0.9
CLDN4-201ENST00000340958 DOK7Q18PE1 504 aa20.66■□□□□ 0.9
CLDN4-201ENST00000340958 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
CLDN4-201ENST00000340958 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
CLDN4-201ENST00000340958 SALL1Q9NSC2 1324 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 GNAT2P19087 354 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 MCM2P49736 904 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 PRELPP51888 382 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 ADCK5Q3MIX3 580 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 NSUN4Q96CB9 384 aaKnown RBP20.65■□□□□ 0.9
CLDN4-201ENST00000340958 DOCK2Q92608 1830 aa20.65■□□□□ 0.9
CLDN4-201ENST00000340958 CYP21A2P08686 494 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 SOGA3Q5TF21 947 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.9
CLDN4-201ENST00000340958 SUPT20HQ8NEM7 779 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 TBC1D22AQ8WUA7 517 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 NACAP1Q9BZK3 213 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 SLC4A4Q9Y6R1 1079 aa20.64■□□□□ 0.9
CLDN4-201ENST00000340958 FGAP02671 866 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 GTF2IP78347 998 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 GSTO1P78417 241 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 CCDC93Q567U6 631 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 LCORLQ8N3X6 602 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 TM6SF1Q9BZW5 370 aa20.64■□□□□ 0.89
CLDN4-201ENST00000340958 SNED1Q8TER0 1413 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
CLDN4-201ENST00000340958 ZNF213O14771 459 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 GRIPAP1Q4V328 841 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 MFSD14BQ5SR56 506 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 TMED8Q6PL24 325 aaPredicted RBP20.63■□□□□ 0.89
CLDN4-201ENST00000340958 PDRG1Q9NUG6 133 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 TIAM2Q8IVF5 1701 aa20.63■□□□□ 0.89
CLDN4-201ENST00000340958 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
CLDN4-201ENST00000340958 TSGA10IPQ3SY00 556 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 TTLL5Q6EMB2 1281 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 RUFY3Q7L099 469 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 ADGRA1Q86SQ6 560 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 NOL10Q9BSC4 688 aaKnown RBP20.62■□□□□ 0.89
CLDN4-201ENST00000340958 NAPBQ9H115 298 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 TAOK3Q9H2K8 898 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 LTBP1Q14766 1721 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 IGSF3O75054 1194 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 CPA1P15085 419 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 TDO2P48775 406 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 HAND2P61296 217 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 RTKN2Q8IZC4 609 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 NEK1Q96PY6 1258 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
CLDN4-201ENST00000340958 ZSWIM6Q9HCJ5 1215 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
CLDN4-201ENST00000340958 LMNB1P20700 586 aa20.61■□□□□ 0.89
CLDN4-201ENST00000340958 DBNDD1Q9H9R9 158 aa20.61■□□□□ 0.89
CLDN4-201ENST00000340958 LTBP3Q9NS15 1303 aa20.61■□□□□ 0.89
CLDN4-201ENST00000340958 LDHCP07864 332 aa20.6■□□□□ 0.89
CLDN4-201ENST00000340958 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
CLDN4-201ENST00000340958 AATFQ9NY61 560 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLDN4-201ENST00000340958 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
CLDN4-201ENST00000340958 DUOX1Q9NRD9 1551 aa20.6■□□□□ 0.89
CLDN4-201ENST00000340958 FOXP2O15409 715 aa20.6■□□□□ 0.89
CLDN4-201ENST00000340958 DYNLL1P63167 89 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 429.9 ms