RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 A0A1W2PQ64 194 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ANGEL1Q9UNK9 670 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 YEATS4O95619 227 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TRDNQ13061 729 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 STK36Q9NRP7 1315 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CDKL5O76039 1030 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TYRO3Q06418 890 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RC3H1Q5TC82 1133 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 FAM173BQ6P4H8 233 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
TRAF3IP2-201ENST00000340026 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CCDC85AQ96PX6 553 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 RASGRF1Q13972 1273 aa12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TDRD7Q8NHU6 1098 aaKnown RBP12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
TRAF3IP2-201ENST00000340026 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ADCY5O95622 1261 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 NT5C2P49902 561 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 UBE4AQ14139 1066 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 VPS72Q15906 364 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TBC1D10CQ8IV04 446 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 WWC3Q9ULE0 1092 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 LY75O60449 1722 aa12.53□□□□□ -0.4
TRAF3IP2-201ENST00000340026 SEMA3EO15041 775 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 NR1I2O75469 434 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 AIDAQ96BJ3 306 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 USP28Q96RU2 1077 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 ANAPC4Q9UJX5 808 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.4
TRAF3IP2-201ENST00000340026 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 TPM2P07951 284 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 IFNL3Q8IZI9 196 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 KRT23Q9C075 422 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
TRAF3IP2-201ENST00000340026 HAND2P61296 217 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BICD2Q8TD16 824 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 EPB41L4AQ9HCS5 686 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 FAM237AA0A1B0GTK4 181 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CDC25BP30305 580 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 ORC3Q9UBD5 711 aaPredicted RBP12.51□□□□□ -0.41
TRAF3IP2-201ENST00000340026 BTAF1O14981 1849 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 GSG1L2A8MUP6 293 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CHRNDQ07001 517 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NTRK3Q16288 839 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 TAF1LQ8IZX4 1826 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 GOLGA6L6A8MZA4 724 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CPLX1O14810 134 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 MYSM1Q5VVJ2 828 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 SASS6Q6UVJ0 657 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CCDC73Q6ZRK6 1079 aa12.5□□□□□ -0.41
TRAF3IP2-201ENST00000340026 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms