RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CLIC4Q9Y696 253 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 CYP21A2P08686 494 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 GSCP56915 257 aaPredicted RBP10.82□□□□□ -0.68
NECAP1-201ENST00000339754 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 CFAP100Q494V2 611 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 USP31Q70CQ4 1352 aa10.82□□□□□ -0.68
NECAP1-201ENST00000339754 STX10O60499 249 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 E2F4Q16254 413 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 WWC2Q6AWC2 1192 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 ANKLE2Q86XL3 938 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
NECAP1-201ENST00000339754 HDAC5Q9UQL6 1122 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
NECAP1-201ENST00000339754 CCT2P78371 535 aaKnown RBP10.81□□□□□ -0.68
NECAP1-201ENST00000339754 MMS22LQ6ZRQ5 1243 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 STOX1Q6ZVD7 989 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 GPATCH11Q8N954 259 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 TC2NQ8N9U0 490 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
NECAP1-201ENST00000339754 TUBE1Q9UJT0 475 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 IGSF1Q8N6C5 1336 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 TOPAZ1Q8N9V7 1692 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 USP6P35125 1406 aa10.81□□□□□ -0.68
NECAP1-201ENST00000339754 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 MYL5Q02045 173 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 AXDND1Q5T1B0 1012 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 EFCAB13Q8IY85 973 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 CNNM3Q8NE01 707 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 NGDNQ8NEJ9 315 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 FAM71BQ8TC56 605 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 EDC3Q96F86 508 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 NCOA5Q9HCD5 579 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 DIP2AQ14689 1571 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 PPFIA4O75335 1185 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 FDPSP14324 419 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 STK38Q15208 465 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 KCNG4Q8TDN1 519 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 AGXT2Q9BYV1 514 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 MRPL44Q9H9J2 332 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 FANCLQ9NW38 375 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 CHPF2Q9P2E5 772 aa10.8□□□□□ -0.68
NECAP1-201ENST00000339754 PUF60Q9UHX1 559 aaKnown RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-201ENST00000339754 POTEB2H3BUK9 544 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 SPTLC2O15270 562 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 YEATS4O95619 227 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 EXOSC10Q01780 885 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CASP8Q14790 479 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 KARSQ15046 597 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 DHX32Q7L7V1 743 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CEP89Q96ST8 783 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 POLR3EQ9NVU0 708 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 NALCNQ8IZF0 1738 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 A0A087WUV0 522 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 ERLIN1O75477 346 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CHGBP05060 677 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 PFKFB1P16118 471 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CMA1P23946 247 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 ADKP55263 362 aaKnown RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CT47A1Q5JQC4 288 aaPredicted RBP10.79□□□□□ -0.68
NECAP1-201ENST00000339754 TADA2BQ86TJ2 420 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 DESI2Q9BSY9 194 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 CDC23Q9UJX2 597 aa10.79□□□□□ -0.68
NECAP1-201ENST00000339754 MYO1BO43795 1136 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 PHACTR2O75167 634 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 WDHD1O75717 1129 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 CCDC129Q6ZRS4 1044 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 CCDC91Q7Z6B0 441 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 CEP112Q8N8E3 955 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 KAZALD1Q96I82 304 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 LAMA4Q16363 1823 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 LRRIQ3A6PVS8 624 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 POLR3DP05423 398 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 PDIA3P30101 505 aaKnown RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 VSNL1P62760 191 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 DNAJC21Q5F1R6 531 aaKnown RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 OTUD7BQ6GQQ9 843 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 PDILTQ8N807 584 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 FAM204AQ9H8W3 233 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-201ENST00000339754 ADAMTSL3P82987 1691 aa10.78□□□□□ -0.68
NECAP1-201ENST00000339754 ANXA1P04083 346 aa10.77□□□□□ -0.68
NECAP1-201ENST00000339754 HMGB1P09429 215 aaKnown RBP10.77□□□□□ -0.68
NECAP1-201ENST00000339754 MTF1Q14872 753 aa10.77□□□□□ -0.68
NECAP1-201ENST00000339754 NCAPD2Q15021 1401 aa10.77□□□□□ -0.68
NECAP1-201ENST00000339754 CCDC102AQ96A19 550 aa10.77□□□□□ -0.68
NECAP1-201ENST00000339754 CXorf56Q9H5V9 222 aa10.77□□□□□ -0.68
NECAP1-201ENST00000339754 C9orf78Q9NZ63 289 aaPredicted RBP10.77□□□□□ -0.68
NECAP1-201ENST00000339754 FMN2Q9NZ56 1722 aa10.77□□□□□ -0.69
NECAP1-201ENST00000339754 CLGNO14967 610 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms