RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 PRKAB2O43741 272 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 STX6O43752 255 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 FGD1P98174 961 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 APOBRQ0VD83 1088 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 CRY2Q49AN0 593 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 GAS2L3Q86XJ1 694 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 EPB41L4AQ9HCS5 686 aaPredicted RBP20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 HIBADHP31937 336 aaKnown RBP20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 ST5P78524 1137 aa20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
ATAD3A-201ENST00000339113 PATL2C9JE40 543 aaKnown RBP20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 GTF3C6Q969F1 213 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 RAI14Q9P0K7 980 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 CYP7A1P22680 504 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 ANKIB1Q9P2G1 1089 aa20.26■□□□□ 0.83
ATAD3A-201ENST00000339113 GSG1L2A8MUP6 293 aa20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 PRPF40AO75400 957 aaKnown RBP20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 ZSCAN22P10073 491 aaPredicted RBP20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 IFNL3Q8IZI9 196 aa20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 TRIM44Q96DX7 344 aaPredicted RBP20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 SCRN1Q12765 414 aa20.25■□□□□ 0.83
ATAD3A-201ENST00000339113 ANTXR2P58335 489 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 ALX1Q15699 326 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 GPR101Q96P66 508 aaPredicted RBP20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 INCENPQ9NQS7 918 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 JAK2O60674 1132 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 JAG2Q9Y219 1238 aa20.24■□□□□ 0.83
ATAD3A-201ENST00000339113 KLHL40Q2TBA0 621 aa20.23■□□□□ 0.83
ATAD3A-201ENST00000339113 NCOA7Q8NI08 942 aa20.23■□□□□ 0.83
ATAD3A-201ENST00000339113 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
ATAD3A-201ENST00000339113 PRC1O43663 620 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 PFKFB2O60825 505 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 TACC3Q9Y6A5 838 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 SEMA3EO15041 775 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 GPSM2P81274 684 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 PPP1R9BQ96SB3 815 aa20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 DDX49Q9Y6V7 483 aaKnown RBP20.22■□□□□ 0.83
ATAD3A-201ENST00000339113 RRP9O43818 475 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 F13A1P00488 732 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 PDIA3P30101 505 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 MCM5P33992 734 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 CCDC173Q0VFZ6 552 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 FBXL16Q8N461 479 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 NAPBQ9H115 298 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 LEMD3Q9Y2U8 911 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 CTDSPL2Q05D32 466 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 GDPD2Q9HCC8 539 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 NCOA5Q9HCD5 579 aaKnown RBP20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 XDHP47989 1333 aa20.21■□□□□ 0.83
ATAD3A-201ENST00000339113 KLRG2A4D1S0 409 aaPredicted RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 VPS37CA5D8V6 355 aaPredicted RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 DYNLL1P63167 89 aaKnown RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 CYB5R4Q7L1T6 521 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 RIOK1Q9BRS2 568 aaKnown RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 NSFL1CQ9UNZ2 370 aaKnown RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 CTDNEP1O95476 244 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 PRDX5P30044 214 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 NLGN1Q8N2Q7 840 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 SDR42E1Q8WUS8 393 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
ATAD3A-201ENST00000339113 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 NEDD4P46934 1319 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 MAGEB6P1A0A0J9YX57 407 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 HMGB2P26583 209 aaKnown RBP20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 MECOMQ03112 1051 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 NAA16Q6N069 864 aaPredicted RBP20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 ZNF274Q96GC6 653 aaPredicted RBP20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 B4E1Z4 1266 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 GNAT2P19087 354 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 EVCP57679 992 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 GPT2Q8TD30 523 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
ATAD3A-201ENST00000339113 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 PPFIA3O75145 1194 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 TDO2P48775 406 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 TRDNQ13061 729 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 GLIPR1L2Q4G1C9 344 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
ATAD3A-201ENST00000339113 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms