RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 TCEANC2Q96MN5 208 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
HPS1-202ENST00000338546 PODXL2Q9NZ53 605 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 SALL1Q9NSC2 1324 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 STX6O43752 255 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 PFKFB2O60825 505 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 CYP7A1P22680 504 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 GJB2P29033 226 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 SPTY2D1Q68D10 685 aaPredicted RBP19.22■□□□□ 0.67
HPS1-202ENST00000338546 ILDR2Q71H61 639 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 RALYLQ86SE5 291 aaKnown RBP19.22■□□□□ 0.67
HPS1-202ENST00000338546 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
HPS1-202ENST00000338546 IFNL3Q8IZI9 196 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 RAI14Q9P0K7 980 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 ABCF2Q9UG63 623 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 ATP6V1DQ9Y5K8 247 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
HPS1-202ENST00000338546 WTIPA6NIX2 430 aaPredicted RBP19.21■□□□□ 0.67
HPS1-202ENST00000338546 SYT1P21579 422 aa19.21■□□□□ 0.67
HPS1-202ENST00000338546 BRF1Q92994 677 aa19.21■□□□□ 0.67
HPS1-202ENST00000338546 NAPBQ9H115 298 aa19.21■□□□□ 0.67
HPS1-202ENST00000338546 ZNF804AQ7Z570 1209 aa19.2■□□□□ 0.66
HPS1-202ENST00000338546 NECAB1Q8N987 351 aa19.2■□□□□ 0.66
HPS1-202ENST00000338546 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
HPS1-202ENST00000338546 IQSEC3Q9UPP2 1182 aaPredicted RBP19.2■□□□□ 0.66
HPS1-202ENST00000338546 CACNA1SQ13698 1873 aa19.2■□□□□ 0.66
HPS1-202ENST00000338546 A0A0G2JLW4 131 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 GSG1L2A8MUP6 293 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 ZSCAN22P10073 491 aaPredicted RBP19.19■□□□□ 0.66
HPS1-202ENST00000338546 KLRK1P26718 216 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 HAND2P61296 217 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
HPS1-202ENST00000338546 GIMAP6Q6P9H5 292 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 TDRD7Q8NHU6 1098 aaKnown RBP19.19■□□□□ 0.66
HPS1-202ENST00000338546 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 PDE6BP35913 854 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 SP8Q8IXZ3 490 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 LCORLQ8N3X6 602 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 CNNM2Q9H8M5 875 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 GGA1Q9UJY5 639 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 SLC4A4Q9Y6R1 1079 aa19.19■□□□□ 0.66
HPS1-202ENST00000338546 LRRC37AA6NMS7 1700 aa19.18■□□□□ 0.66
HPS1-202ENST00000338546 EP400Q96L91 3159 aa19.18■□□□□ 0.66
HPS1-202ENST00000338546 NSUN4Q96CB9 384 aaKnown RBP19.18■□□□□ 0.66
HPS1-202ENST00000338546 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
HPS1-202ENST00000338546 EPB41L4AQ9HCS5 686 aaPredicted RBP19.18■□□□□ 0.66
HPS1-202ENST00000338546 MAST2Q6P0Q8 1798 aa19.18■□□□□ 0.66
HPS1-202ENST00000338546 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 PRC1O43663 620 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 NPR1P16066 1061 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 GPSM2P81274 684 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 HMGN5P82970 282 aaKnown RBP19.17■□□□□ 0.66
HPS1-202ENST00000338546 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 KRT23Q9C075 422 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
HPS1-202ENST00000338546 QSER1Q2KHR3 1735 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 KLHL40Q2TBA0 621 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 LARP1BQ659C4 914 aaKnown RBP19.16■□□□□ 0.66
HPS1-202ENST00000338546 TXNRD3Q86VQ6 643 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 SMARCC2Q8TAQ2 1214 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 TMEM87BQ96K49 555 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 RNF41Q9H4P4 317 aaPredicted RBP19.16■□□□□ 0.66
HPS1-202ENST00000338546 LMBRD1Q9NUN5 540 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 ANAPC4Q9UJX5 808 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
HPS1-202ENST00000338546 F13A1P00488 732 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 SRGNP10124 158 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
HPS1-202ENST00000338546 DEKP35659 375 aaKnown RBP19.15■□□□□ 0.66
HPS1-202ENST00000338546 TDO2P48775 406 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 SCRN1Q12765 414 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 TBC1D10CQ8IV04 446 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 STAG1Q8WVM7 1258 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 LRRC2Q9BYS8 371 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 NSFL1CQ9UNZ2 370 aaKnown RBP19.15■□□□□ 0.66
HPS1-202ENST00000338546 MTMR6Q9Y217 621 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
HPS1-202ENST00000338546 MMP10P09238 476 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 IL1R1P14778 569 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 PDIA3P30101 505 aaKnown RBP19.15■□□□□ 0.66
HPS1-202ENST00000338546 MECOMQ03112 1051 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 APOBRQ0VD83 1088 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 ADGRA1Q86SQ6 560 aa19.15■□□□□ 0.66
HPS1-202ENST00000338546 PPEF1O14829 653 aaPredicted RBP19.14■□□□□ 0.65
HPS1-202ENST00000338546 UFL1O94874 794 aa19.14■□□□□ 0.65
HPS1-202ENST00000338546 NT5C2P49902 561 aa19.14■□□□□ 0.65
HPS1-202ENST00000338546 ANTXR2P58335 489 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms