RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CCDC171Q6TFL3 1326 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 SPOPO43791 374 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 GKAP1Q5VSY0 366 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 CIB2O75838 187 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 KRT19P08727 400 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 PAXBP1Q9Y5B6 917 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 CACYBPQ9HB71 228 aaKnown RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 TRIM27P14373 513 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 LETM2Q2VYF4 491 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 KSR1Q8IVT5 923 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 SETDB1Q15047 1291 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 GBP7Q8N8V2 638 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 RTL1A6NKG5 1358 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 KRT86O43790 486 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 TMOD4Q9NZQ9 345 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 PTPRCP08575 1304 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 GNAQP50148 359 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 EAPPQ56P03 285 aaPredicted RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 MIPOL1Q8TD10 442 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 TRIM31Q9BZY9 425 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 MTRF1LQ9UGC7 380 aaKnown RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 ZNF174Q15697 407 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CCDC122Q5T0U0 273 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 SAMD15Q9P1V8 674 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
SHANK2-201ENST00000338508 ZNF131P52739 623 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CLUL1Q15846 466 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 CABLES1Q8TDN4 633 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 HMG20BQ9P0W2 317 aa13.22□□□□□ -0.29
SHANK2-201ENST00000338508 LPXNO60711 386 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 TBC1D7Q9P0N9 293 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 KIF3CO14782 793 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 TRAF1Q13077 416 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 RNF169Q8NCN4 708 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 IGSF3O75054 1194 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
SHANK2-201ENST00000338508 KRT83P78385 493 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 CALCOCO2Q13137 446 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
SHANK2-201ENST00000338508 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 DACT1Q9NYF0 836 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
SHANK2-201ENST00000338508 USH1GQ495M9 461 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 MTUS1Q9ULD2 1270 aa13.21□□□□□ -0.29
SHANK2-201ENST00000338508 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 TRAF5O00463 557 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 TSTA3Q13630 321 aaPredicted RBP13.21□□□□□ -0.3
SHANK2-201ENST00000338508 PPP4R4Q6NUP7 873 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.3
SHANK2-201ENST00000338508 TMX3Q96JJ7 454 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.3
SHANK2-201ENST00000338508 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
SHANK2-201ENST00000338508 TXNDC9O14530 226 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-201ENST00000338508 NUF2Q9BZD4 464 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 STRN3Q13033 797 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 ARHGEF2Q92974 986 aaKnown RBP13.2□□□□□ -0.3
SHANK2-201ENST00000338508 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 KIFAP3Q92845 792 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 SH2D4BQ5SQS7 431 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 JAKMIP2Q96AA8 810 aa13.2□□□□□ -0.3
SHANK2-201ENST00000338508 PARP1P09874 1014 aaKnown RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 IVNS1ABPQ9Y6Y0 642 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
SHANK2-201ENST00000338508 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
SHANK2-201ENST00000338508 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms